| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237048
Identifier: 57237048
GI number: 57237048
Start: 50958
End: 51659
Strand: Reverse
Name: 57237048
Synonym: CJE0033
Alternate gene names: NA
Gene position: 51659-50958 (Counterclockwise)
Preceding gene: 57237049
Following gene: 57236938
Centisome position: 2.91
GC content: 32.34
Gene sequence:
>702_bases ATGAAAACAAATAATATCTTTATGGCTTTAGCCATAGTTTTGGCAAGTTTGATTCTAGCTTTTGGATTTAACAAGGCTTT AAGTGATTTTAAAACACTTGAAAGAAGTGTAAGTGTAAAGGGTTTAAGTCAAAAAGAAGTCGAAGCGGATACTTTGATAC TTCCTATAAAATTCACAAGATCAAACAACAATCTTACAAATTTATACGAAGAACTAGAACAAGATAAAGAAAATATCATC AAATTTTTAGAAAAACAAGGCATAAAAGAAGATGAGATCAGCTACAACTCGCCAAATATCATAGATCGTTTAAGCGATCC TTATAGCAACGACACTCAAGCTGCATACCGATACATAGGCACTGCGAATTTACTCATCTATACTCAAAATGTAAAGCTTG GAAAAAGCATACTAGAAAACATTTCAAGTCTTGCAAAATTTGGTATAGTAACAAAAATCGATGATTATGATATAGAATAC CTTTACACCAAGCTAAATGATATAAAACCACAAATGATAGAAGAAGCAACGCTCAATGCTAGAAATGCAGCGATAAAATT CGCACAAGACTCAAACAGCCATCTAGGCAAGATAAAAAAGGCTTCTCAAGGACAATTTAGCATCAGCAACAGAGATAAAA ACACCCCTTATATCAAAACTATAAGAGTGGTTTCTACTATAGAATACTACTTAAAAGACTGA
Upstream 100 bases:
>100_bases CTATTAACGCAAATACGCCGATAATCCTTGCTTTTGTAATGTGTGCTTGCGTATTGGTTGCAAATATGATATATTTTCTA ATCAAAATAAAGGAGAAAAA
Downstream 100 bases:
>100_bases TGATAAAATTTCAAGCTAAGCTTTAAGGCTTAGCTTGGCACTATGGAATTTTTTCGTGCGGTTTTTTGGAGTGAGAATAT ACAAAGCAAAAGTATAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQKEVEADTLILPIKFTRSNNNLTNLYEELEQDKENII KFLEKQGIKEDEISYNSPNIIDRLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY LYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIRVVSTIEYYLKD
Sequences:
>Translated_233_residues MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQKEVEADTLILPIKFTRSNNNLTNLYEELEQDKENII KFLEKQGIKEDEISYNSPNIIDRLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY LYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIRVVSTIEYYLKD >Mature_233_residues MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQKEVEADTLILPIKFTRSNNNLTNLYEELEQDKENII KFLEKQGIKEDEISYNSPNIIDRLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY LYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIRVVSTIEYYLKD
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26457; Mature: 26457
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQKEVEADTLILPIKFTR CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEEC SNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIIDRLSDPYSNDTQAAYRYIG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHC TANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEYLYTKLNDIKPQMIEEATLNA CCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHHHCCC RNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIRVVSTIEYYLKD CHHEEEEECCCCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQKEVEADTLILPIKFTR CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEEC SNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIIDRLSDPYSNDTQAAYRYIG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHC TANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEYLYTKLNDIKPQMIEEATLNA CCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCHHHHHHHHCCC RNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIRVVSTIEYYLKD CHHEEEEECCCCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA