| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is hemK [H]
Identifier: 57237024
GI number: 57237024
Start: 756238
End: 757053
Strand: Reverse
Name: hemK [H]
Synonym: CJE0822
Alternate gene names: 57237024
Gene position: 757053-756238 (Counterclockwise)
Preceding gene: 57237025
Following gene: 57237023
Centisome position: 42.58
GC content: 26.47
Gene sequence:
>816_bases TTGACTATAAAAAATGCTCTTATGGAAGCTAAATCTAGCTTAAAAGGTTATGAAAATGAAGCAGTATTTATACTCTGTGA ATATCTAAAAAAAGATAAAGCTTGGTTATTTTTAAACCAAGATATACAAATAGATCATGAACCTTATTTTAAGCTTATAA GGCGTTTTAAATCTGGAGAACCTTTTGAATATATATTTGAAAAAGTGGATTTTTGGGGCTTAGAATTTAAGATAAAAAAA GGCATTCTAATCCCTCGCTACGATAGTGAAATTTTACTTTTTCAAATTTTAAATTTATGCAAAAAAAATACTTTTAATGG GATTTTAGAAATAGGATTTGGAAGTGGAATTTTAAGCATTATTTTAGCCAAAGAACTTGGGTTAAAAATCACAGCCTGCG ATATCAATCTCAAAGCCTTAGAATTAGCTTTAGAGAATGCCAAATTACACAAAGTCGATCACTTGATTGACTTTAAACTT TGTAATTTTAAGCAAATTAAAGAAAATTATGATTTTATTTTTTCAAATCCACCCTATATTAAAAATTCATATCCTATAGA TATTTGGGTGCAAAAAGAACCCAAAGAGGCTTTATTTGGAGGAGAAAAAGGATATGAAATTCTAGAAGAAATCATACATT TTTCCCTTGATAAAAAAGTTAAATTTTTAGCTTGCGAATTTGGCTATGATCAAAAAGAAATTTTGGAAAAAATTTTATAT CAAAATAATTTCATTGTTGATTTTTTCAAAGATGAACAAGGTTATAATCGTGCTTTTGTAGCTAAATTTACAAATATGCG TTATGATAAAAAATAA
Upstream 100 bases:
>100_bases CCCTAGCAAGAGAAAATAAAGCTTTTATCAAAACAAGTAAAATATATGCATTTTTTTATCTCAGCCATCCAAGTATTAGT GATAGAATCAAGGCTCTTTC
Downstream 100 bases:
>100_bases AAGGAGAAACTCTTGAAAGCTGTTAATTTATTTTTACTTGCCTCCATCATAGGGGTTGAACTCATACTAGGAATAGTTGT TGCGCCAACAATTTTTTTTC
Product: HemK family modification methylase
Products: NA
Alternate protein names: M.AaoHemKP [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIQIDHEPYFKLIRRFKSGEPFEYIFEKVDFWGLEFKIKK GILIPRYDSEILLFQILNLCKKNTFNGILEIGFGSGILSIILAKELGLKITACDINLKALELALENAKLHKVDHLIDFKL CNFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILY QNNFIVDFFKDEQGYNRAFVAKFTNMRYDKK
Sequences:
>Translated_271_residues MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIQIDHEPYFKLIRRFKSGEPFEYIFEKVDFWGLEFKIKK GILIPRYDSEILLFQILNLCKKNTFNGILEIGFGSGILSIILAKELGLKITACDINLKALELALENAKLHKVDHLIDFKL CNFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILY QNNFIVDFFKDEQGYNRAFVAKFTNMRYDKK >Mature_270_residues TIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIQIDHEPYFKLIRRFKSGEPFEYIFEKVDFWGLEFKIKKG ILIPRYDSEILLFQILNLCKKNTFNGILEIGFGSGILSIILAKELGLKITACDINLKALELALENAKLHKVDHLIDFKLC NFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQ NNFIVDFFKDEQGYNRAFVAKFTNMRYDKK
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Escherichia coli, GI1787463, Length=249, Percent_Identity=27.710843373494, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87082085, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 31948; Mature: 31816
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIQIDHEPYFKLIRRFKSGE CCHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCEEEEECCCEEECCCHHHHHHHHHCCCC PFEYIFEKVDFWGLEFKIKKGILIPRYDSEILLFQILNLCKKNTFNGILEIGFGSGILSI CHHHHHHHHHHCCEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHH ILAKELGLKITACDINLKALELALENAKLHKVDHLIDFKLCNFKQIKENYDFIFSNPPYI HHHHHHCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCC KNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILY CCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHH QNNFIVDFFKDEQGYNRAFVAKFTNMRYDKK CCCEEEEEEECCCCCCEEEEEHHHCCCCCCC >Mature Secondary Structure TIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIQIDHEPYFKLIRRFKSGE CHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCEEEEECCCEEECCCHHHHHHHHHCCCC PFEYIFEKVDFWGLEFKIKKGILIPRYDSEILLFQILNLCKKNTFNGILEIGFGSGILSI CHHHHHHHHHHCCEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHH ILAKELGLKITACDINLKALELALENAKLHKVDHLIDFKLCNFKQIKENYDFIFSNPPYI HHHHHHCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCC KNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILY CCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHH QNNFIVDFFKDEQGYNRAFVAKFTNMRYDKK CCCEEEEEEECCCCCCEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]