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The map label for this gene is 57236943

Identifier: 57236943

GI number: 57236943

Start: 668544

End: 669509

Strand: Reverse

Name: 57236943

Synonym: CJE0733

Alternate gene names: NA

Gene position: 669509-668544 (Counterclockwise)

Preceding gene: 57236944

Following gene: 57238187

Centisome position: 37.66

GC content: 28.05

Gene sequence:

>966_bases
ATGTATAGAAAAGAGCTTCAAATCTTACTTTCTAAAGATTCAATACCTAATTTTTTCTTTCTTTATGGAGCAGATAATTT
TCAAAGCGAACTTTATGCTGAATTTATAAAAGAAAAATATAAGCCCGATGAAACTTTAAAACTTTTTTTTGAAGAATACA
ACTTCACTCGTGCGAGTGATTTTTTAAGCGCAGGATCGCTTTTTAGCGAAAAAAAATTACTAGAAATCAAAACTTCTAAA
AAAATTCCAACAAAAGATCTTAAAATTTTAGTCGAACTTTGCAAAAACAATACGAACAATTTCTTTCTTTTAGAGCTTTA
TGATGAAAATTCTAAACAAAGCGATATAGAAAAAATTTTCTCTCCTCATTTTGTAAGATTTTTCAAAGCTAACGGAGCTA
AAGAAGGCGTGGAACTTTTAAGCATAAAAGCAAAACAACTAGGGGTTGAAATCACTCAAAATGCTTTATTTACTCTTTTT
GCAAGTTTTGATGAAAACTTATATCTTGCTGCGAGTGAGCTTAATAAATTTAGTGGTTTAAGAGTAGATGAAAAAACCAT
AGAACAATACTGCTATAGTTTGAATACAGGAAGTTTTGAAAGCTTTTTTGAGAAAATTTTAAAAAAACAAGACTTTAAAA
GCGAACTTGAAAAAATTTTAGATAATTTTAATGAAATTGCTTTAATCAACTCTTTGTATAATTCTTTTTATCGTTTGTTT
AAAATCGCACTTTATGCTAAAGTCAATGGTAAAATTGACTTTAAAGATCTTTTAGGCTATACTCCACCTCCTCAAGTGGG
ACAAAATTTAAGCTCTCAAGCCTTTAATTTAAAAATCGAACAATATAAAGAAATTTTCACTCTTTTGCTTAAAAGCGAAT
ACGAGCTTAAAACCAATTCTAAGCTCGTAAAAAAAGAATTTTTGATTTCAAATTTGCTTAAACTTGCAAGGATTTTGAAA
AGCTAG

Upstream 100 bases:

>100_bases
GTAAATTTGCTAGAAAGTGTTGAGGTGCAAATCATAGAAGCGGATATAGTTATGGCAAAAATTTATGCTAAAATCACCCA
AAGACTTATAAAGGAAGAAA

Downstream 100 bases:

>100_bases
ATTTATATACTTGGTAAAAATAAATATTACTTATCTTTCATCTTGAAAACTTACAAATTCATCAAAACTACTAAGGAATT
TATCATTTATATTAAAGTTC

Product: DNA polymerase III subunit delta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDETLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSK
KIPTKDLKILVELCKNNTNNFFLLELYDENSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
ASFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEKILDNFNEIALINSLYNSFYRLF
KIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFNLKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILK
S

Sequences:

>Translated_321_residues
MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDETLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSK
KIPTKDLKILVELCKNNTNNFFLLELYDENSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
ASFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEKILDNFNEIALINSLYNSFYRLF
KIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFNLKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILK
S
>Mature_321_residues
MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDETLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSK
KIPTKDLKILVELCKNNTNNFFLLELYDENSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
ASFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEKILDNFNEIALINSLYNSFYRLF
KIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFNLKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILK
S

Specific function: Could be the functional equivalent of DNA polymerase III delta subunit (holA) [H]

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010372 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: NA

Molecular weight: Translated: 37410; Mature: 37410

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDETLKLFFEEYNFTRASD
CCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHH
FLSAGSLFSEKKLLEIKTSKKIPTKDLKILVELCKNNTNNFFLLELYDENSKQSDIEKIF
HHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
SPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLFASFDENLYLAASELNKFSGL
CHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCC
RVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEKILDNFNEIALINSLYNSFYRLF
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
KIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFNLKIEQYKEIFTLLLKSEYELKTNS
HHHHHEEECCCEEHHHHCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCH
KLVKKEFLISNLLKLARILKS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDETLKLFFEEYNFTRASD
CCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHH
FLSAGSLFSEKKLLEIKTSKKIPTKDLKILVELCKNNTNNFFLLELYDENSKQSDIEKIF
HHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
SPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLFASFDENLYLAASELNKFSGL
CHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCC
RVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEKILDNFNEIALINSLYNSFYRLF
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
KIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFNLKIEQYKEIFTLLLKSEYELKTNS
HHHHHEEECCCEEHHHHCCCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCH
KLVKKEFLISNLLKLARILKS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]