| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57236942
Identifier: 57236942
GI number: 57236942
Start: 665952
End: 668513
Strand: Direct
Name: 57236942
Synonym: CJE0732
Alternate gene names: NA
Gene position: 665952-668513 (Clockwise)
Preceding gene: 57238177
Following gene: 57236945
Centisome position: 37.46
GC content: 23.46
Gene sequence:
>2562_bases ATGGTGATGAAAATGTTTAATAAAAAACTACACGAGCTTTTACAAGAAGAATTTGGAAAAAGAGGTATAGAGCAAATAGA AATTCCTTTTTACGTAAAAGAGAATTTATCAAAAGAATTAAGAATTTATCAAGAAAAAGCTCTAAAGTATTATTATGCAA ATTCTGATAGCATAAAACAAAGACATTTAATGTTTAATATGGCAACAGGAAGTGGAAAAACTCTTATAATGGCTGCATTA ATACTAGATTGTTATAACAAAGGATATAGAAATTTTATATTTTTTGTAAATTCTACTTCGATTTTAGAAAAAACTAAAGC AAATTTTGCAAATAAATATTCTAGCAAATATCTTTTTAAAGAAAATATAAATATAGACTCTAAAAATATAGAAATTAATA TTATAAATAATCTTTTTGAAAGCAAAAATGAATGCATTAATATATATTTTACAACTATACAAGCTTTATTTTCTCTTTTT AAAAATGAAAGAGAAAATTCTTTAAGCTTTGAAGATTTAAAAGATGAAAAGCTTGTATTTTTAGCTGATGAAGCTCATCA TTTAAATAGTGATACTAAAAGCAAAAACGAAAACGAGCTTAAAGAAGGTTGGGAAGCTATTATAAAAAGAGCTTATGAAA GCAATAATGAAAATTTATTATTTGAATTTAGTGCTACTATTCCGCAAGAATTTAATGTTTTGGAGAAATATCAAGATAAA ATTATTTATGAATACACCTTAAGAGAATTTTGCAAAGAGGGATATTCTAAACGTATATTTTTAGTTAAGTATGACAATGA TAGTTTAGAACATAGATTTTTAGGAGCCGTGCTTTGTAGTCTTTATAGAGAGTTGTTGGCTCAAAAATATAATATCATAT TAAAGCCTGTTGTTTTACTTAAGAGTGAATCTATAAAAGAATCTATGCAAAATCAAGAAAAATTTATAGATTTTATAGAT AATTTAGAAAGCTTGCATATAGAAGATTTTTATAAAAATATAAACAAAGAAAGTGATCTTTTAAATAAAAGTTTAGAGTT TTTTAAAAAAGAATATCAAAATACTTATGCAAAAACTATTGTAAATTTTTTGAAAAATAATTTTAAAACGCTTTATATGT TAAACACAAATGATGATAAAGAGCTAGAAAAAAATCAAATTTTACTTAATAGCTTAGAAGAAAAAGATAATCAAATAAGA GTTATTTTTTGCGTTGATAAACTTAATGAAGGTTGGGATGTTTTAAATCTTTTTGATATAGTTAGGCTTGGAAATAAAAA GGCAAGTAAAACAATAACCACAAAGGAAGCACAACTTATAGGAAGAGGTGCTAGATATTATTCTTTCAAAAGCGATTTGT TTGATTTTGATGATGAGTTTAGATTTAAAAGAAAGTATGATAGTGATCTTGAAAATGAGTTAAATGCTTTAGAGAAATTA ACTTATCATACTAGAAATGATGTTGAGTTTATCAAGCAACTCAATGAAAGCATGAATAAAGAAGGATTATTATTTGAGGA GGAAAAAACACGCATAGATTTAATAGTCAATGAAAAAATAAAAGAGATTATTAAAAATAACAAAATTTATTACGCTAATA ATAAAAGAATCAAAAAGCGTGATTTGAAAAATTTTTACATTACAAGAATTGAGATGGAACAAAAAATAAAAGGTTTGCAA ATTCCTTATTTTTCAAATTCTATAAAAGAAAGTGAGGAGAAATTTGAAGAAATCAAAGAAGAATATGATCTTCAAAAACC ATCTGCTCTTAATCATATAGATAATATATATTTTTTAAAAGCTATGAATATATTAGGACTTGATTTTAACAAAATCAATG AAAATTTTACTTTTAAAAGCAAAAAAGATTTTATAGAAAATTGTTTAAAAAATACAGTTGTTTGTTTTTCAAAACGACAA GAATTTAATCAAATAAATAATCTTGAAATAGCCAAATATATTTTAGAAAATTTTAAATCGCTCAAGCAAAACATAAAACA AGAATACGAAGTAAGTGAGTTTATAACTCATGAATTTAATATAGGGAATAAGGTAGTATTTAAAAATAAAGAGAATTTTA AGGAAATGAATTTTGAGTGGCTTTATCACAAAACTTTTTGTTTTGATAGTAATTTAGAAAAAGAATTTTTAAATTTTATA GAAGTGAAAAAAGATGAAATCAATAAAGTGTTTTCTAAATGGTTTGTTATAAGAAATGAAGGCTTTGAAGAATTTAAAAT TTACGATAATAGAAAAGATGAAGTAACTTATGCTATGGGATTTGAACCTGATTTTATTTTCTTTGGTAAGAAAAATAAAG ATGATGATAATTTTTTAAGCATACAATGTTTTATAGAAACAAAAGGAGAGCATTTAGCAATAGCAAAAGATGCTTGGAAG GAAGAATTCTTAGAGACTTTAAAAGGAAAAATAATAACCACCAAGGATGATAAAAAATTAACTCTTCAATCTTTACCGTT TTTTATAAACAAGAACTTTAATATAAATGATAAATTCCTTAGTAGTTTTGATGAATTTGTAAGTTTTCAAGATGAAAGAT AA
Upstream 100 bases:
>100_bases CTTGTTTTAGACTCTAATATGGATTATCTTTTATATGGTGATATAAAAGATGAAGATTATGCCTTGTCTAAAGAAATAAT AAAACTTAATAAAATATTTT
Downstream 100 bases:
>100_bases GTAATATTTATTTTTACCAAGTATATAAATCTAGCTTTTCAAAATCCTTGCAAGTTTAAGCAAATTTGAAATCAAAAATT CTTTTTTTACGAGCTTAGAA
Product: type III restriction-modification enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 853; Mature: 853
Protein sequence:
>853_residues MVMKMFNKKLHELLQEEFGKRGIEQIEIPFYVKENLSKELRIYQEKALKYYYANSDSIKQRHLMFNMATGSGKTLIMAAL ILDCYNKGYRNFIFFVNSTSILEKTKANFANKYSSKYLFKENINIDSKNIEINIINNLFESKNECINIYFTTIQALFSLF KNERENSLSFEDLKDEKLVFLADEAHHLNSDTKSKNENELKEGWEAIIKRAYESNNENLLFEFSATIPQEFNVLEKYQDK IIYEYTLREFCKEGYSKRIFLVKYDNDSLEHRFLGAVLCSLYRELLAQKYNIILKPVVLLKSESIKESMQNQEKFIDFID NLESLHIEDFYKNINKESDLLNKSLEFFKKEYQNTYAKTIVNFLKNNFKTLYMLNTNDDKELEKNQILLNSLEEKDNQIR VIFCVDKLNEGWDVLNLFDIVRLGNKKASKTITTKEAQLIGRGARYYSFKSDLFDFDDEFRFKRKYDSDLENELNALEKL TYHTRNDVEFIKQLNESMNKEGLLFEEEKTRIDLIVNEKIKEIIKNNKIYYANNKRIKKRDLKNFYITRIEMEQKIKGLQ IPYFSNSIKESEEKFEEIKEEYDLQKPSALNHIDNIYFLKAMNILGLDFNKINENFTFKSKKDFIENCLKNTVVCFSKRQ EFNQINNLEIAKYILENFKSLKQNIKQEYEVSEFITHEFNIGNKVVFKNKENFKEMNFEWLYHKTFCFDSNLEKEFLNFI EVKKDEINKVFSKWFVIRNEGFEEFKIYDNRKDEVTYAMGFEPDFIFFGKKNKDDDNFLSIQCFIETKGEHLAIAKDAWK EEFLETLKGKIITTKDDKKLTLQSLPFFINKNFNINDKFLSSFDEFVSFQDER
Sequences:
>Translated_853_residues MVMKMFNKKLHELLQEEFGKRGIEQIEIPFYVKENLSKELRIYQEKALKYYYANSDSIKQRHLMFNMATGSGKTLIMAAL ILDCYNKGYRNFIFFVNSTSILEKTKANFANKYSSKYLFKENINIDSKNIEINIINNLFESKNECINIYFTTIQALFSLF KNERENSLSFEDLKDEKLVFLADEAHHLNSDTKSKNENELKEGWEAIIKRAYESNNENLLFEFSATIPQEFNVLEKYQDK IIYEYTLREFCKEGYSKRIFLVKYDNDSLEHRFLGAVLCSLYRELLAQKYNIILKPVVLLKSESIKESMQNQEKFIDFID NLESLHIEDFYKNINKESDLLNKSLEFFKKEYQNTYAKTIVNFLKNNFKTLYMLNTNDDKELEKNQILLNSLEEKDNQIR VIFCVDKLNEGWDVLNLFDIVRLGNKKASKTITTKEAQLIGRGARYYSFKSDLFDFDDEFRFKRKYDSDLENELNALEKL TYHTRNDVEFIKQLNESMNKEGLLFEEEKTRIDLIVNEKIKEIIKNNKIYYANNKRIKKRDLKNFYITRIEMEQKIKGLQ IPYFSNSIKESEEKFEEIKEEYDLQKPSALNHIDNIYFLKAMNILGLDFNKINENFTFKSKKDFIENCLKNTVVCFSKRQ EFNQINNLEIAKYILENFKSLKQNIKQEYEVSEFITHEFNIGNKVVFKNKENFKEMNFEWLYHKTFCFDSNLEKEFLNFI EVKKDEINKVFSKWFVIRNEGFEEFKIYDNRKDEVTYAMGFEPDFIFFGKKNKDDDNFLSIQCFIETKGEHLAIAKDAWK EEFLETLKGKIITTKDDKKLTLQSLPFFINKNFNINDKFLSSFDEFVSFQDER >Mature_853_residues MVMKMFNKKLHELLQEEFGKRGIEQIEIPFYVKENLSKELRIYQEKALKYYYANSDSIKQRHLMFNMATGSGKTLIMAAL ILDCYNKGYRNFIFFVNSTSILEKTKANFANKYSSKYLFKENINIDSKNIEINIINNLFESKNECINIYFTTIQALFSLF KNERENSLSFEDLKDEKLVFLADEAHHLNSDTKSKNENELKEGWEAIIKRAYESNNENLLFEFSATIPQEFNVLEKYQDK IIYEYTLREFCKEGYSKRIFLVKYDNDSLEHRFLGAVLCSLYRELLAQKYNIILKPVVLLKSESIKESMQNQEKFIDFID NLESLHIEDFYKNINKESDLLNKSLEFFKKEYQNTYAKTIVNFLKNNFKTLYMLNTNDDKELEKNQILLNSLEEKDNQIR VIFCVDKLNEGWDVLNLFDIVRLGNKKASKTITTKEAQLIGRGARYYSFKSDLFDFDDEFRFKRKYDSDLENELNALEKL TYHTRNDVEFIKQLNESMNKEGLLFEEEKTRIDLIVNEKIKEIIKNNKIYYANNKRIKKRDLKNFYITRIEMEQKIKGLQ IPYFSNSIKESEEKFEEIKEEYDLQKPSALNHIDNIYFLKAMNILGLDFNKINENFTFKSKKDFIENCLKNTVVCFSKRQ EFNQINNLEIAKYILENFKSLKQNIKQEYEVSEFITHEFNIGNKVVFKNKENFKEMNFEWLYHKTFCFDSNLEKEFLNFI EVKKDEINKVFSKWFVIRNEGFEEFKIYDNRKDEVTYAMGFEPDFIFFGKKNKDDDNFLSIQCFIETKGEHLAIAKDAWK EEFLETLKGKIITTKDDKKLTLQSLPFFINKNFNINDKFLSSFDEFVSFQDER
Specific function: Unknown
COG id: COG3421
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR006935 [H]
Pfam domain/function: PF04851 ResIII [H]
EC number: =3.1.21.5 [H]
Molecular weight: Translated: 102058; Mature: 102058
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMKMFNKKLHELLQEEFGKRGIEQIEIPFYVKENLSKELRIYQEKALKYYYANSDSIKQ CCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCHHHHHHHHHHHHEEEECCCCCHHH RHLMFNMATGSGKTLIMAALILDCYNKGYRNFIFFVNSTSILEKTKANFANKYSSKYLFK EEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCEEEE ENINIDSKNIEINIINNLFESKNECINIYFTTIQALFSLFKNERENSLSFEDLKDEKLVF ECCCCCCCCEEEEEHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEE LADEAHHLNSDTKSKNENELKEGWEAIIKRAYESNNENLLFEFSATIPQEFNVLEKYQDK EECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH IIYEYTLREFCKEGYSKRIFLVKYDNDSLEHRFLGAVLCSLYRELLAQKYNIILKPVVLL HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSESIKESMQNQEKFIDFIDNLESLHIEDFYKNINKESDLLNKSLEFFKKEYQNTYAKTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VNFLKNNFKTLYMLNTNDDKELEKNQILLNSLEEKDNQIRVIFCVDKLNEGWDVLNLFDI HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH VRLGNKKASKTITTKEAQLIGRGARYYSFKSDLFDFDDEFRFKRKYDSDLENELNALEKL HHHCCCHHCCCEEHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH TYHTRNDVEFIKQLNESMNKEGLLFEEEKTRIDLIVNEKIKEIIKNNKIYYANNKRIKKR HHCCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHHCCCEEEECCCCHHHH DLKNFYITRIEMEQKIKGLQIPYFSNSIKESEEKFEEIKEEYDLQKPSALNHIDNIYFLK HHHHHHEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AMNILGLDFNKINENFTFKSKKDFIENCLKNTVVCFSKRQEFNQINNLEIAKYILENFKS HHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LKQNIKQEYEVSEFITHEFNIGNKVVFKNKENFKEMNFEWLYHKTFCFDSNLEKEFLNFI HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCEEEEEEEEEEECCCCHHHHHHHH EVKKDEINKVFSKWFVIRNEGFEEFKIYDNRKDEVTYAMGFEPDFIFFGKKNKDDDNFLS HHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCEEE IQCFIETKGEHLAIAKDAWKEEFLETLKGKIITTKDDKKLTLQSLPFFINKNFNINDKFL EEEEEECCCCEEEEEHHHHHHHHHHHHCCCEEEECCCCEEEHHHCCEEEECCCCCCHHHH SSFDEFVSFQDER HHHHHHHCCCCCC >Mature Secondary Structure MVMKMFNKKLHELLQEEFGKRGIEQIEIPFYVKENLSKELRIYQEKALKYYYANSDSIKQ CCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCHHHHHHHHHHHHEEEECCCCCHHH RHLMFNMATGSGKTLIMAALILDCYNKGYRNFIFFVNSTSILEKTKANFANKYSSKYLFK EEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCEEEE ENINIDSKNIEINIINNLFESKNECINIYFTTIQALFSLFKNERENSLSFEDLKDEKLVF ECCCCCCCCEEEEEHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCEEE LADEAHHLNSDTKSKNENELKEGWEAIIKRAYESNNENLLFEFSATIPQEFNVLEKYQDK EECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH IIYEYTLREFCKEGYSKRIFLVKYDNDSLEHRFLGAVLCSLYRELLAQKYNIILKPVVLL HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSESIKESMQNQEKFIDFIDNLESLHIEDFYKNINKESDLLNKSLEFFKKEYQNTYAKTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VNFLKNNFKTLYMLNTNDDKELEKNQILLNSLEEKDNQIRVIFCVDKLNEGWDVLNLFDI HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH VRLGNKKASKTITTKEAQLIGRGARYYSFKSDLFDFDDEFRFKRKYDSDLENELNALEKL HHHCCCHHCCCEEHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH TYHTRNDVEFIKQLNESMNKEGLLFEEEKTRIDLIVNEKIKEIIKNNKIYYANNKRIKKR HHCCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEEECHHHHHHHHCCCEEEECCCCHHHH DLKNFYITRIEMEQKIKGLQIPYFSNSIKESEEKFEEIKEEYDLQKPSALNHIDNIYFLK HHHHHHEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AMNILGLDFNKINENFTFKSKKDFIENCLKNTVVCFSKRQEFNQINNLEIAKYILENFKS HHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LKQNIKQEYEVSEFITHEFNIGNKVVFKNKENFKEMNFEWLYHKTFCFDSNLEKEFLNFI HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCEEEEEEEEEEECCCCHHHHHHHH EVKKDEINKVFSKWFVIRNEGFEEFKIYDNRKDEVTYAMGFEPDFIFFGKKNKDDDNFLS HHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCCCCEEE IQCFIETKGEHLAIAKDAWKEEFLETLKGKIITTKDDKKLTLQSLPFFINKNFNINDKFL EEEEEECCCCEEEEEHHHHHHHHHHHHCCCEEEECCCCEEEHHHCCEEEECCCCCCHHHH SSFDEFVSFQDER HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]