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The map label for this gene is rbr [H]

Identifier: 57236925

GI number: 57236925

Start: 15000

End: 15551

Strand: Reverse

Name: rbr [H]

Synonym: CJE0011

Alternate gene names: 57236925

Gene position: 15551-15000 (Counterclockwise)

Preceding gene: 57236927

Following gene: 57236924

Centisome position: 0.87

GC content: 35.51

Gene sequence:

>552_bases
ATGAAATGTATCACTACAGATTTAACTGCAGTAAATTTGATGAAAGCTTTTGCGGGCGAATCTATGGCGAGAAACAAATA
CGATTTATTTGCTGATGTAGCTGAAGAAGAAGGTTGGCATGCGGTTGCTAGACATTTTAGAGAAGCAGCTGAAAATGAAA
AATGGCATGCAAGAGCAGAATTTAAAGCTTATCATGAAATCGTTGATGGAAAACCTTTAGAAGTAACTACAAAAAACCTA
GTAAGTGCTGCAGAAGGTGAAAACTATGAGCACACAACTATGTATCCAAATTTTGCAAAAATTGCTGAAGATGAAGGTAA
AAAGGCTATAGCAAGATTATTTACAGCTATTGGCAAAGTAGAAATCGAACACGAAAGAGAATATCTAGCGCTTAAAAAAA
TGCTCGAAGAAGAAGAATTTTTTAATAGTGAAGTAGAAGAATTATGGGTTTGTGAAGTATGCGGACATATACATCGTGGC
AAAAAAGCTCCAGCAGCCTGTCCTTTATGTAAAGCACCAAAAGAGTATTTTAAACGCGAATTTTTGGGTTAA

Upstream 100 bases:

>100_bases
CAAAATGAGACAATATGAAACCTATAAATGCCAAAAATGTGGTAATGAAGTAGAAGTTCAAAATGTAGGTGGAGGTAAGC
TTAGTTGTTGTGGTGAAGAA

Downstream 100 bases:

>100_bases
GTTAAGAAATTCTTATCCTTTTTAAGATAATATTATAATTATTTTTTAATAAAAGGATAAGAAAATGAAAAAATTACTAT
TTTTATTTTTTGCTTTAACG

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKCITTDLTAVNLMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDGKPLEVTTKNL
VSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREYLALKKMLEEEEFFNSEVEELWVCEVCGHIHRG
KKAPAACPLCKAPKEYFKREFLG

Sequences:

>Translated_183_residues
MKCITTDLTAVNLMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDGKPLEVTTKNL
VSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREYLALKKMLEEEEFFNSEVEELWVCEVCGHIHRG
KKAPAACPLCKAPKEYFKREFLG
>Mature_183_residues
MKCITTDLTAVNLMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDGKPLEVTTKNL
VSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREYLALKKMLEEEEFFNSEVEELWVCEVCGHIHRG
KKAPAACPLCKAPKEYFKREFLG

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20959; Mature: 20959

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCITTDLTAVNLMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAE
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
FKAYHEIVDGKPLEVTTKNLVSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKV
HHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIEHEREYLALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FLG
CCC
>Mature Secondary Structure
MKCITTDLTAVNLMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAE
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH
FKAYHEIVDGKPLEVTTKNLVSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKV
HHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EIEHEREYLALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FLG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11972784; 12949112 [H]