| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57236927
Identifier: 57236927
GI number: 57236927
Start: 17983
End: 19209
Strand: Reverse
Name: 57236927
Synonym: CJE0015
Alternate gene names: NA
Gene position: 19209-17983 (Counterclockwise)
Preceding gene: 57236929
Following gene: 57236925
Centisome position: 1.08
GC content: 32.27
Gene sequence:
>1227_bases ATGATAAACATAAAACTCATAGAACACATTTTTAAAGCCGCTTCTATCAGTCGTTGGAATGATTATCCAAGAATGGCAAA TTTGGTTGAACTTGACAAACAAGCTCATAAATTCATCATCGCATATTTTATCGCTAAAATGGAAAAAGATGTGGATATGA GAGTGATTATAGAAGGGGGAATTTTTGAGTTTTTAAGTCGTGTTGTGGTAACTGATATACGCCCTGATGTGTATCATGAA ATCGTGCGTCAAAAAAAAGCTGAAGTTAATGCTTGGGTTTTAAGCAAAATCGAACCTATGATAGAAGATATAGAAGATGG GGAATTTCTAAAGCGTTTTGAAGCGTATTTAAACGGTAATGCTTATGCTAAAGAAAGACTTATCTTAAAAGCAGCTTCAT ATTTTGCTACAAGATGGGAATTTAACATAGTTTATCAAACCTCAGCTTTTTTAAATGATATTGATGAGATTAAAAACAAA GTTGAAGAAGAATTAGAAGATTACTATGAGCTTATAGGAGCTAGAAAAATTGCTTTAAATCAAAAAATAGCCAAAATTAT TGATCTTAGCGGAAGACTTCGCTTTCAAAAACGTTGGGCTCAAACTCCACGCATACCAGAAACCGCGGTTTTAGGACATA TGCTTGTGGTGGCGATTTTAGGATATTTTTACTCACTAAAAATCAAGGCTTGCGATAAAAGACTTGAGAATAATTTTTAT TGTGCTTTGTTTCATGATTTGCCAGAGTCTTTAACACGTGATATTATCAGCCCTGTAAAATACGGCATTGATGGACTTCA TGATATCATAAATGATTATGAAATGAAACTTATTAATGAAAGAATTTTACCCTTTGTACCTGAGGGTTTAAGGGCTGAGT TTTCTTATATTTTAGGCATTAGAGAAGGTAGAAACGGTGAGTCAAATTTTGTAAAAAATGAGTTTGAAAATCGCACTTAT AAAAATGCTAAAATCGAGCTTTGCAGCGGAAGTTTAAGCTCTTTTAATGAAAATGAATTTGGTGCTATAGATGGTAAGGC GCTTAAATACTGCGATAAAATTGCTGCTTATATAGAAGCAGGACTTAGTATAAGTTATGGTGTAAAGTCTAAAGAACTTG AAAGTGGTTTTTTAGGAATGTATGAGTTTTTTAAAGAAAATCCTACCATAGATGGGGTGAATTTTTTTGAAATTTGTGAA AGTTTAAGAGAGTATTTTAAAATTTAA
Upstream 100 bases:
>100_bases ATACAAAGTGCTTTTTTACTCATTTTTATCCTTAAATTTGCTATAATTTCACAATTTTAACGAAAATTTTTAAATTTAAA TTGCAAAAAAAGGCAAAAGC
Downstream 100 bases:
>100_bases ATAAGATTTTTATACTACTATTTTCAATATGTTTTAAATAAAAATATTATAATTTCAAATTTTATTTTGTATAAAATATA AAGGAGTTATTATGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: HAD Superfamily Hydrolase; Competence Protein ComGF; Metal-Dependent Phosphohydrolase HD Region; Metal Dependent Phosphohydrolase; Cytoplasmic HAD Superfamily Hydrolase
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFIAKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHE IVRQKKAEVNAWVLSKIEPMIEDIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVAILGYFYSLKIKACDKRLENNFY CALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMKLINERILPFVPEGLRAEFSYILGIREGRNGESNFVKNEFENRTY KNAKIELCSGSLSSFNENEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMYEFFKENPTIDGVNFFEICE SLREYFKI
Sequences:
>Translated_408_residues MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFIAKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHE IVRQKKAEVNAWVLSKIEPMIEDIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVAILGYFYSLKIKACDKRLENNFY CALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMKLINERILPFVPEGLRAEFSYILGIREGRNGESNFVKNEFENRTY KNAKIELCSGSLSSFNENEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMYEFFKENPTIDGVNFFEICE SLREYFKI >Mature_408_residues MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFIAKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHE IVRQKKAEVNAWVLSKIEPMIEDIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVAILGYFYSLKIKACDKRLENNFY CALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMKLINERILPFVPEGLRAEFSYILGIREGRNGESNFVKNEFENRTY KNAKIELCSGSLSSFNENEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMYEFFKENPTIDGVNFFEICE SLREYFKI
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47335; Mature: 47335
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFIAKMEKDVDMRVIIEGG CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC IFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIEDIEDGEFLKRFEAYLNGN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC AYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNKVEEELEDYYELIGARKIALN HHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVAILGYFYSLKIKACDKRLENNFY HHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE CALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMKLINERILPFVPEGLRAEFSYILGI EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEE REGRNGESNFVKNEFENRTYKNAKIELCSGSLSSFNENEFGAIDGKALKYCDKIAAYIEA CCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GLSISYGVKSKELESGFLGMYEFFKENPTIDGVNFFEICESLREYFKI CCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFIAKMEKDVDMRVIIEGG CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC IFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIEDIEDGEFLKRFEAYLNGN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC AYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNKVEEELEDYYELIGARKIALN HHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVAILGYFYSLKIKACDKRLENNFY HHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE CALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMKLINERILPFVPEGLRAEFSYILGI EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEE REGRNGESNFVKNEFENRTYKNAKIELCSGSLSSFNENEFGAIDGKALKYCDKIAAYIEA CCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GLSISYGVKSKELESGFLGMYEFFKENPTIDGVNFFEICESLREYFKI CCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA