Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228834

Identifier: 21228834

GI number: 21228834

Start: 3269558

End: 3270181

Strand: Reverse

Name: 21228834

Synonym: MM_2732

Alternate gene names: NA

Gene position: 3270181-3269558 (Counterclockwise)

Preceding gene: 21228835

Following gene: 21228833

Centisome position: 79.83

GC content: 43.59

Gene sequence:

>624_bases
ATGGCTGCCTCCTGGTCTCTATCCCATACCCTGGGAGAGAAAGAGAAAACTTTTTACTGGCGGATAGACAGCCGGGGGAA
TATCTTCATAAAAAGAAAATTCAGGAAAGACATCTTTTCCAGGATTGATAAAATTAGCTGCAACAACCTCGACAGGCTCC
AGGGATTCATGCAGGACAGGGAATGGAAAGACCTTGCAAATAATGCCGCAAAACTGTATATGGGGACTGAAAAAAACGGC
ATAGGCAAATTCATGTACAGTCTCAGGCCAGAGGTTCCGTATGCCCAGCTCTCAAGCCAGTTAGCAGCCATTTTTTACCG
CTCTGAAGTATGGGAGTGGAACAGGAAGAAAAGAGGCATGAAGTTCCTTCTTCTCCCGGGAGGCTGGCAGGAAAAGACAA
CGCAATACTACAGAAATTCGCTGATCTCAGAAAGGAAATTACCAGAACCGGAGAGCCAGGGCTGTTTTATATCTGATTTT
TTTAAAAATAGTCTGCAACAAGAAAATGAACTTAAAAAGCTGCAAGAACTTAAACGGCGGCAAGAACCGCTGCAAAAAAC
CATACAGGAAGAACCAGTACAGAAAATTGTGCAGGCAAAACTTTCGACTTTTTTTGGATCCTAA

Upstream 100 bases:

>100_bases
TAGAAAAGGATGCTCCATAAAAAATATTATTTTTCTTTCAAAAGTAACACCATCATAAATTACAAACATTTTTTTATATC
CAGGATCTGATTTATTCTTC

Downstream 100 bases:

>100_bases
AAGAAAAAAATCGGGAAAAGTGGATAAATTACGGTATCTATCCATTAACCTTATTCAAAATGAGAAACTTTTCTGGTCAC
CCTTGACGGGATGGCCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAASWSLSHTLGEKEKTFYWRIDSRGNIFIKRKFRKDIFSRIDKISCNNLDRLQGFMQDREWKDLANNAAKLYMGTEKNG
IGKFMYSLRPEVPYAQLSSQLAAIFYRSEVWEWNRKKRGMKFLLLPGGWQEKTTQYYRNSLISERKLPEPESQGCFISDF
FKNSLQQENELKKLQELKRRQEPLQKTIQEEPVQKIVQAKLSTFFGS

Sequences:

>Translated_207_residues
MAASWSLSHTLGEKEKTFYWRIDSRGNIFIKRKFRKDIFSRIDKISCNNLDRLQGFMQDREWKDLANNAAKLYMGTEKNG
IGKFMYSLRPEVPYAQLSSQLAAIFYRSEVWEWNRKKRGMKFLLLPGGWQEKTTQYYRNSLISERKLPEPESQGCFISDF
FKNSLQQENELKKLQELKRRQEPLQKTIQEEPVQKIVQAKLSTFFGS
>Mature_206_residues
AASWSLSHTLGEKEKTFYWRIDSRGNIFIKRKFRKDIFSRIDKISCNNLDRLQGFMQDREWKDLANNAAKLYMGTEKNGI
GKFMYSLRPEVPYAQLSSQLAAIFYRSEVWEWNRKKRGMKFLLLPGGWQEKTTQYYRNSLISERKLPEPESQGCFISDFF
KNSLQQENELKKLQELKRRQEPLQKTIQEEPVQKIVQAKLSTFFGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24570; Mature: 24438

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASWSLSHTLGEKEKTFYWRIDSRGNIFIKRKFRKDIFSRIDKISCNNLDRLQGFMQDR
CCCCCCHHHHHCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCH
EWKDLANNAAKLYMGTEKNGIGKFMYSLRPEVPYAQLSSQLAAIFYRSEVWEWNRKKRGM
HHHHHHCCHHEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFLLLPGGWQEKTTQYYRNSLISERKLPEPESQGCFISDFFKNSLQQENELKKLQELKRR
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QEPLQKTIQEEPVQKIVQAKLSTFFGS
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AASWSLSHTLGEKEKTFYWRIDSRGNIFIKRKFRKDIFSRIDKISCNNLDRLQGFMQDR
CCCCCHHHHHCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCH
EWKDLANNAAKLYMGTEKNGIGKFMYSLRPEVPYAQLSSQLAAIFYRSEVWEWNRKKRGM
HHHHHHCCHHEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFLLLPGGWQEKTTQYYRNSLISERKLPEPESQGCFISDFFKNSLQQENELKKLQELKRR
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QEPLQKTIQEEPVQKIVQAKLSTFFGS
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA