Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is marC [H]

Identifier: 21228833

GI number: 21228833

Start: 3268601

End: 3269239

Strand: Reverse

Name: marC [H]

Synonym: MM_2731

Alternate gene names: 21228833

Gene position: 3269239-3268601 (Counterclockwise)

Preceding gene: 21228834

Following gene: 21228823

Centisome position: 79.81

GC content: 41.63

Gene sequence:

>639_bases
ATGGTAACCGAAAATCTCGGATTTTTTATTTATGTATTCTCATCCATCTTTGTGGTTGTAAGCCCTATCAGTGGAGTTGT
AACTTTTATCTCCATGACAAGCAAGATGACCCGCAAAGAAAAAAACGATATCGCAAAAAAAGCAGTCATACTAGCATGTG
TAATTGCCCTGTTTTTTGCGATTACTGGAAGTATGATACTTAAATTATTCAGCATCAGTGTGGACTCCCTCAGGGTTGCC
GGAGGTCTTTTGCTTTTCAGCATAGCGTTTGACATGATGCACGCAAAGGTCTCACGTGAGAGCATTACAGAAGAAGAAAT
TACTCAGTCCCAGGAAAGGGAAGATATCTGGGTCTTCCCTATAGGCCTTCCACTTCTGACAGGACCCGGTACGATCAGCA
CAGTAATTGTCATTATGGGCATGGCAGAAGGTGTTCAACAAAAAGCAATAGTAGTTGCCTCAATAATACTGACATTCATT
ATTTGCCTGTTTATCTTCCTTTTCTCAAGGAGGCTGCACAAATTCATAGGATACAATGGAATGCTGGTCTTCACAAGGCT
TATGGGGCTTTTGCTTGCGGCTCTTGCAGTTGACCTGACCGCTGCGGGAATAATAAATATATTTGGGCTCACAATTTAA

Upstream 100 bases:

>100_bases
AAGACAAGCAATAAAACTCCGGTAACATTCAAAAGCTAAACACAGAATTATATAAAATAAAGAATAAAATCTCGAGTCCG
TAAAAGGACAGGAGAAAAAA

Downstream 100 bases:

>100_bases
ATTGAGGAGTTTGATTTGAAAATGTGTCTTATAAACAGCAACATGTACTGCACCCAGTAATCCAGGTTTGAGAACCAGGA
CTCTCGAACTTTATAAACTC

Product: multiple antibiotic resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFAITGSMILKLFSISVDSLRVA
GGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFPIGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFI
ICLFIFLFSRRLHKFIGYNGMLVFTRLMGLLLAALAVDLTAAGIINIFGLTI

Sequences:

>Translated_212_residues
MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFAITGSMILKLFSISVDSLRVA
GGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFPIGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFI
ICLFIFLFSRRLHKFIGYNGMLVFTRLMGLLLAALAVDLTAAGIINIFGLTI
>Mature_212_residues
MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFAITGSMILKLFSISVDSLRVA
GGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFPIGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFI
ICLFIFLFSRRLHKFIGYNGMLVFTRLMGLLLAALAVDLTAAGIINIFGLTI

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=199, Percent_Identity=36.1809045226131, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI1787809, Length=200, Percent_Identity=26, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789842, Length=192, Percent_Identity=26.0416666666667, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23183; Mature: 23183

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITGSMILKLFSISVDSLRVAGGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEE
IGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFIICLFIFLFSRRLHKFIGYNG
ECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
MLVFTRLMGLLLAALAVDLTAAGIINIFGLTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTENLGFFIYVFSSIFVVVSPISGVVTFISMTSKMTRKEKNDIAKKAVILACVIALFFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITGSMILKLFSISVDSLRVAGGLLLFSIAFDMMHAKVSRESITEEEITQSQEREDIWVFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEE
IGLPLLTGPGTISTVIVIMGMAEGVQQKAIVVASIILTFIICLFIFLFSRRLHKFIGYNG
ECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
MLVFTRLMGLLLAALAVDLTAAGIINIFGLTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]