| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228810
Identifier: 21228810
GI number: 21228810
Start: 3236981
End: 3237796
Strand: Reverse
Name: 21228810
Synonym: MM_2708
Alternate gene names: NA
Gene position: 3237796-3236981 (Counterclockwise)
Preceding gene: 21228811
Following gene: 21228809
Centisome position: 79.04
GC content: 38.85
Gene sequence:
>816_bases GTGCAGGAAAGAAAACAGTTAAAAGAAAAGCTAAATACTCAGAAAAATAATTACCAGAATTCGAGGAAAAACTTCCTTAT AATTAGGAGCAGGTTAAGAGCAGGAAATTACAATGAAAAAGACCTGGAAACTACAAGGGAATACCTGAATGCAAGTATTG ACTATATGATAGCCCACCTTGAAAAAGTTCAGTACAACCTTGAACAGTCGAACGGGAGCGGCACGGAAGCGAGAATTAAT GCTATTGAGGAAAGAATAAGCCAGCTACAGGAAGAGAAGAAAGCTATTGAAAAAGCCGAAGACCTTGAAGACTTTACAAA AGCAACTGAATCTGTGCGCGGCGTCTGGAACAATGTGAAAAACAGGACTGCTGTAGAGACTGGACAGACTGCAGGCGAGA AAATAGATGATTTTGCTAACAAATCAGAGTCAATTTCCAGAAAGCTTGAAAAAGAACTGGAAAAACTGAATGAAACCGGA GTAAATACATCTGAACTTGAGTCAAAGCTTGAAAATTATAATGCCCTGATGGCTTCAGCAAGGAAGAATAGCGAGGCTGC AAAAGAGATTTACAATAAAGAAAACGCTACCGAGGAAGAACTTTCAAAAGCAAACGGTTATCTTCAAAATGCACTTGGAG AAATAAAAGAAGCAAATCATGTCCTGAAAGAAATCTTCGAGGAATTGGAGCAGTATAGATCTGAAGAGACCAACAGAAAC AGAGCCAGAAATAATCCAGAACCAGAGTTCGATGATGCCAAAAATGGAACGGAAAATGAATCAGAAAATTCCACTGAGGA AGAACTGGAGAGTTAA
Upstream 100 bases:
>100_bases TTTTGAAACTTTTCAGAAAACTGAATTGCTTCAGGAGAAAAATCAGGAAAAAAATCAAAATGAGAATTTAACCCGGGGAC AGAAACAGCCTCATGAAGAA
Downstream 100 bases:
>100_bases GGGGGCAAAAAAATGGTAAAATTTACACATATATTTGTAATCTCAATATTAATTTTCTGGCTTGCAGCATCAGGCTGCGT TGAAGACAATACAGACGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHLEKVQYNLEQSNGSGTEARIN AIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVKNRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETG VNTSELESKLENYNALMASARKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN RARNNPEPEFDDAKNGTENESENSTEEELES
Sequences:
>Translated_271_residues MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHLEKVQYNLEQSNGSGTEARIN AIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVKNRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETG VNTSELESKLENYNALMASARKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN RARNNPEPEFDDAKNGTENESENSTEEELES >Mature_271_residues MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHLEKVQYNLEQSNGSGTEARIN AIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVKNRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETG VNTSELESKLENYNALMASARKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN RARNNPEPEFDDAKNGTENESENSTEEELES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31242; Mature: 31242
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EKVQYNLEQSNGSGTEARINAIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETGVNTSELESKLENYNALMASA HHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARNNPEPEFDDAKNGTENESENSTEEELES HCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EKVQYNLEQSNGSGTEARINAIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETGVNTSELESKLENYNALMASA HHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARNNPEPEFDDAKNGTENESENSTEEELES HCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA