Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228810

Identifier: 21228810

GI number: 21228810

Start: 3236981

End: 3237796

Strand: Reverse

Name: 21228810

Synonym: MM_2708

Alternate gene names: NA

Gene position: 3237796-3236981 (Counterclockwise)

Preceding gene: 21228811

Following gene: 21228809

Centisome position: 79.04

GC content: 38.85

Gene sequence:

>816_bases
GTGCAGGAAAGAAAACAGTTAAAAGAAAAGCTAAATACTCAGAAAAATAATTACCAGAATTCGAGGAAAAACTTCCTTAT
AATTAGGAGCAGGTTAAGAGCAGGAAATTACAATGAAAAAGACCTGGAAACTACAAGGGAATACCTGAATGCAAGTATTG
ACTATATGATAGCCCACCTTGAAAAAGTTCAGTACAACCTTGAACAGTCGAACGGGAGCGGCACGGAAGCGAGAATTAAT
GCTATTGAGGAAAGAATAAGCCAGCTACAGGAAGAGAAGAAAGCTATTGAAAAAGCCGAAGACCTTGAAGACTTTACAAA
AGCAACTGAATCTGTGCGCGGCGTCTGGAACAATGTGAAAAACAGGACTGCTGTAGAGACTGGACAGACTGCAGGCGAGA
AAATAGATGATTTTGCTAACAAATCAGAGTCAATTTCCAGAAAGCTTGAAAAAGAACTGGAAAAACTGAATGAAACCGGA
GTAAATACATCTGAACTTGAGTCAAAGCTTGAAAATTATAATGCCCTGATGGCTTCAGCAAGGAAGAATAGCGAGGCTGC
AAAAGAGATTTACAATAAAGAAAACGCTACCGAGGAAGAACTTTCAAAAGCAAACGGTTATCTTCAAAATGCACTTGGAG
AAATAAAAGAAGCAAATCATGTCCTGAAAGAAATCTTCGAGGAATTGGAGCAGTATAGATCTGAAGAGACCAACAGAAAC
AGAGCCAGAAATAATCCAGAACCAGAGTTCGATGATGCCAAAAATGGAACGGAAAATGAATCAGAAAATTCCACTGAGGA
AGAACTGGAGAGTTAA

Upstream 100 bases:

>100_bases
TTTTGAAACTTTTCAGAAAACTGAATTGCTTCAGGAGAAAAATCAGGAAAAAAATCAAAATGAGAATTTAACCCGGGGAC
AGAAACAGCCTCATGAAGAA

Downstream 100 bases:

>100_bases
GGGGGCAAAAAAATGGTAAAATTTACACATATATTTGTAATCTCAATATTAATTTTCTGGCTTGCAGCATCAGGCTGCGT
TGAAGACAATACAGACGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHLEKVQYNLEQSNGSGTEARIN
AIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVKNRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETG
VNTSELESKLENYNALMASARKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN
RARNNPEPEFDDAKNGTENESENSTEEELES

Sequences:

>Translated_271_residues
MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHLEKVQYNLEQSNGSGTEARIN
AIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVKNRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETG
VNTSELESKLENYNALMASARKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN
RARNNPEPEFDDAKNGTENESENSTEEELES
>Mature_271_residues
MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHLEKVQYNLEQSNGSGTEARIN
AIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVKNRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETG
VNTSELESKLENYNALMASARKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN
RARNNPEPEFDDAKNGTENESENSTEEELES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31242; Mature: 31242

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKVQYNLEQSNGSGTEARINAIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETGVNTSELESKLENYNALMASA
HHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN
HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARNNPEPEFDDAKNGTENESENSTEEELES
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MQERKQLKEKLNTQKNNYQNSRKNFLIIRSRLRAGNYNEKDLETTREYLNASIDYMIAHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKVQYNLEQSNGSGTEARINAIEERISQLQEEKKAIEKAEDLEDFTKATESVRGVWNNVK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRTAVETGQTAGEKIDDFANKSESISRKLEKELEKLNETGVNTSELESKLENYNALMASA
HHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
RKNSEAAKEIYNKENATEEELSKANGYLQNALGEIKEANHVLKEIFEELEQYRSEETNRN
HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RARNNPEPEFDDAKNGTENESENSTEEELES
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA