Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228809

Identifier: 21228809

GI number: 21228809

Start: 3236708

End: 3236968

Strand: Reverse

Name: 21228809

Synonym: MM_2707

Alternate gene names: NA

Gene position: 3236968-3236708 (Counterclockwise)

Preceding gene: 21228810

Following gene: 21228807

Centisome position: 79.02

GC content: 39.46

Gene sequence:

>261_bases
ATGGTAAAATTTACACATATATTTGTAATCTCAATATTAATTTTCTGGCTTGCAGCATCAGGCTGCGTTGAAGACAATAC
AGACGTGGGAGAAGCAGGTATATCCCAGGAGATTCCGGGTGCAGAGGATGGTGAAAATACCTCAGCAAAACAGGAGCTAA
CCGAAGCAGATCTTAAGGAGTTTGAGGAAAATGTTACAGACCTTGAGGACCTGCTAAATAATTCAAGCCTTGACGAAGAA
ATAGTTATTGAAGAACTTTAA

Upstream 100 bases:

>100_bases
AAATAATCCAGAACCAGAGTTCGATGATGCCAAAAATGGAACGGAAAATGAATCAGAAAATTCCACTGAGGAAGAACTGG
AGAGTTAAGGGGGCAAAAAA

Downstream 100 bases:

>100_bases
AAAAGATATTTAAGAATAGATTAAAAAAGATATTTAAGAATAGAAAAAGATGATCTCATTTGAAGAACATCTTTTCTTTA
TTTTTCATTTTCCGGACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKEFEENVTDLEDLLNNSSLDEE
IVIEEL

Sequences:

>Translated_86_residues
MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKEFEENVTDLEDLLNNSSLDEE
IVIEEL
>Mature_86_residues
MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKEFEENVTDLEDLLNNSSLDEE
IVIEEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9473; Mature: 9473

Theoretical pI: Translated: 3.45; Mature: 3.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FEENVTDLEDLLNNSSLDEEIVIEEL
HHHHHHHHHHHHCCCCCCCHHHCCCC
>Mature Secondary Structure
MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FEENVTDLEDLLNNSSLDEEIVIEEL
HHHHHHHHHHHHCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA