| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228809
Identifier: 21228809
GI number: 21228809
Start: 3236708
End: 3236968
Strand: Reverse
Name: 21228809
Synonym: MM_2707
Alternate gene names: NA
Gene position: 3236968-3236708 (Counterclockwise)
Preceding gene: 21228810
Following gene: 21228807
Centisome position: 79.02
GC content: 39.46
Gene sequence:
>261_bases ATGGTAAAATTTACACATATATTTGTAATCTCAATATTAATTTTCTGGCTTGCAGCATCAGGCTGCGTTGAAGACAATAC AGACGTGGGAGAAGCAGGTATATCCCAGGAGATTCCGGGTGCAGAGGATGGTGAAAATACCTCAGCAAAACAGGAGCTAA CCGAAGCAGATCTTAAGGAGTTTGAGGAAAATGTTACAGACCTTGAGGACCTGCTAAATAATTCAAGCCTTGACGAAGAA ATAGTTATTGAAGAACTTTAA
Upstream 100 bases:
>100_bases AAATAATCCAGAACCAGAGTTCGATGATGCCAAAAATGGAACGGAAAATGAATCAGAAAATTCCACTGAGGAAGAACTGG AGAGTTAAGGGGGCAAAAAA
Downstream 100 bases:
>100_bases AAAAGATATTTAAGAATAGATTAAAAAAGATATTTAAGAATAGAAAAAGATGATCTCATTTGAAGAACATCTTTTCTTTA TTTTTCATTTTCCGGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKEFEENVTDLEDLLNNSSLDEE IVIEEL
Sequences:
>Translated_86_residues MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKEFEENVTDLEDLLNNSSLDEE IVIEEL >Mature_86_residues MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKEFEENVTDLEDLLNNSSLDEE IVIEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9473; Mature: 9473
Theoretical pI: Translated: 3.45; Mature: 3.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FEENVTDLEDLLNNSSLDEEIVIEEL HHHHHHHHHHHHCCCCCCCHHHCCCC >Mature Secondary Structure MVKFTHIFVISILIFWLAASGCVEDNTDVGEAGISQEIPGAEDGENTSAKQELTEADLKE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FEENVTDLEDLLNNSSLDEEIVIEEL HHHHHHHHHHHHCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA