| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21228789
Identifier: 21228789
GI number: 21228789
Start: 3210982
End: 3211923
Strand: Reverse
Name: 21228789
Synonym: MM_2687
Alternate gene names: NA
Gene position: 3211923-3210982 (Counterclockwise)
Preceding gene: 21228790
Following gene: 21228788
Centisome position: 78.41
GC content: 25.9
Gene sequence:
>942_bases ATGTTTCATTCATTTTTCAACACTTATTGTAATAAAAAAGATTCCGATGAAAAGCTTAAAAGACACATTGGAGAAACGCA AATACCTAAGTTTAGTGTTCTTGTCCAAGATATTTTAGATAATGCTTATCGTGATAACTTAATTATCGAAGATTTGAAAC AGAATGAAAATATAATAACTGAATTTCCTAAAAAAATAGCAGAATTAGTGTATTCAATATCGATAATAGATAATTCAATT GATAAAAAAGAAGATTGTGTAGACGAATTAATTCTAATTTCCGATATTTGCATTTTCATGGAAAAGTTTCTCAATACTAT TAAATATCTTGATAATCTAGAATTGAATATAGAAATATCAAAACTATTACAAGATGTCAATAATTTATTTAATTTACTTG GAAAAGAATTGGCATTAAAAAGAGATTTTAATAAATTTTATGTAAATTATGATATGCCTAATTATTTAAAGTTAACAAAT AGCGACTTTTTGCTGTATATTGATTTAACATTGCAATTGATAAGAATGGATAAACGAGAGTATATAGCATCTTTTTTCAA ATATTATTCTCTAATGGACATGTTAATTGATAGTATCGTTGATTTTGAGGATGATTATGAGTCAAAATCTTATAATCCTC TTCAGAATATAGTTAAAAGCGATGTCTATGACATAGATACTATTACTAATATTGCAATGAGTTATGGTAAGGATGCTATG AAAATAGCTAATGAACAAAATGGCCATCTAGCGATGTATTTGACATATTTAGCTAGAGCAGAGATTGAAGCGCTAAGTAT CTTCAAGAAATATACCTATGAATTATCAAGGGATAAAAATCTAAGAAAACAAATTTTAAAACCATATCCATGGGAGGAAA GTGAAACTAACTTAAATATAAATCTATCTATTTGGAAGTTTACAGAAAGTCCTATAAAATAG
Upstream 100 bases:
>100_bases AAAAATTCCAAATCAGAAAACCAAAAAAATATACAATGCTAACAAAACTGACTTAAAACTATAACAAACTCAAAACAAAA TAAAGGAGGTGAACAACTAT
Downstream 100 bases:
>100_bases GACTAGTGTCATGGAAATTTAATTCTTGCACATAGTCTTTGGCAGCACACCATCAGTGCATAAGGATTCTGAGCTTAATA GGTGATCAATAACTAAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIITEFPKKIAELVYSISIIDNSI DKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEISKLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTN SDFLLYIDLTLQLIRMDKREYIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNINLSIWKFTESPIK
Sequences:
>Translated_313_residues MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIITEFPKKIAELVYSISIIDNSI DKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEISKLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTN SDFLLYIDLTLQLIRMDKREYIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNINLSIWKFTESPIK >Mature_313_residues MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIITEFPKKIAELVYSISIIDNSI DKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEISKLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTN SDFLLYIDLTLQLIRMDKREYIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNINLSIWKFTESPIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37074; Mature: 37074
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIIT CCCHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH EFPKKIAELVYSISIIDNSIDKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEIS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH KLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTNSDFLLYIDLTLQLIRMDKRE HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHH YIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHH KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEE NLSIWKFTESPIK EEEEEEECCCCCC >Mature Secondary Structure MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIIT CCCHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH EFPKKIAELVYSISIIDNSIDKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEIS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH KLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTNSDFLLYIDLTLQLIRMDKRE HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHH YIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHH KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNI HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEE NLSIWKFTESPIK EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA