Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228789

Identifier: 21228789

GI number: 21228789

Start: 3210982

End: 3211923

Strand: Reverse

Name: 21228789

Synonym: MM_2687

Alternate gene names: NA

Gene position: 3211923-3210982 (Counterclockwise)

Preceding gene: 21228790

Following gene: 21228788

Centisome position: 78.41

GC content: 25.9

Gene sequence:

>942_bases
ATGTTTCATTCATTTTTCAACACTTATTGTAATAAAAAAGATTCCGATGAAAAGCTTAAAAGACACATTGGAGAAACGCA
AATACCTAAGTTTAGTGTTCTTGTCCAAGATATTTTAGATAATGCTTATCGTGATAACTTAATTATCGAAGATTTGAAAC
AGAATGAAAATATAATAACTGAATTTCCTAAAAAAATAGCAGAATTAGTGTATTCAATATCGATAATAGATAATTCAATT
GATAAAAAAGAAGATTGTGTAGACGAATTAATTCTAATTTCCGATATTTGCATTTTCATGGAAAAGTTTCTCAATACTAT
TAAATATCTTGATAATCTAGAATTGAATATAGAAATATCAAAACTATTACAAGATGTCAATAATTTATTTAATTTACTTG
GAAAAGAATTGGCATTAAAAAGAGATTTTAATAAATTTTATGTAAATTATGATATGCCTAATTATTTAAAGTTAACAAAT
AGCGACTTTTTGCTGTATATTGATTTAACATTGCAATTGATAAGAATGGATAAACGAGAGTATATAGCATCTTTTTTCAA
ATATTATTCTCTAATGGACATGTTAATTGATAGTATCGTTGATTTTGAGGATGATTATGAGTCAAAATCTTATAATCCTC
TTCAGAATATAGTTAAAAGCGATGTCTATGACATAGATACTATTACTAATATTGCAATGAGTTATGGTAAGGATGCTATG
AAAATAGCTAATGAACAAAATGGCCATCTAGCGATGTATTTGACATATTTAGCTAGAGCAGAGATTGAAGCGCTAAGTAT
CTTCAAGAAATATACCTATGAATTATCAAGGGATAAAAATCTAAGAAAACAAATTTTAAAACCATATCCATGGGAGGAAA
GTGAAACTAACTTAAATATAAATCTATCTATTTGGAAGTTTACAGAAAGTCCTATAAAATAG

Upstream 100 bases:

>100_bases
AAAAATTCCAAATCAGAAAACCAAAAAAATATACAATGCTAACAAAACTGACTTAAAACTATAACAAACTCAAAACAAAA
TAAAGGAGGTGAACAACTAT

Downstream 100 bases:

>100_bases
GACTAGTGTCATGGAAATTTAATTCTTGCACATAGTCTTTGGCAGCACACCATCAGTGCATAAGGATTCTGAGCTTAATA
GGTGATCAATAACTAAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIITEFPKKIAELVYSISIIDNSI
DKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEISKLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTN
SDFLLYIDLTLQLIRMDKREYIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM
KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNINLSIWKFTESPIK

Sequences:

>Translated_313_residues
MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIITEFPKKIAELVYSISIIDNSI
DKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEISKLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTN
SDFLLYIDLTLQLIRMDKREYIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM
KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNINLSIWKFTESPIK
>Mature_313_residues
MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIITEFPKKIAELVYSISIIDNSI
DKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEISKLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTN
SDFLLYIDLTLQLIRMDKREYIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM
KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNINLSIWKFTESPIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37074; Mature: 37074

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIIT
CCCHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH
EFPKKIAELVYSISIIDNSIDKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEIS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH
KLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTNSDFLLYIDLTLQLIRMDKRE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHH
YIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHH
KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEE
NLSIWKFTESPIK
EEEEEEECCCCCC
>Mature Secondary Structure
MFHSFFNTYCNKKDSDEKLKRHIGETQIPKFSVLVQDILDNAYRDNLIIEDLKQNENIIT
CCCHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH
EFPKKIAELVYSISIIDNSIDKKEDCVDELILISDICIFMEKFLNTIKYLDNLELNIEIS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH
KLLQDVNNLFNLLGKELALKRDFNKFYVNYDMPNYLKLTNSDFLLYIDLTLQLIRMDKRE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHH
YIASFFKYYSLMDMLIDSIVDFEDDYESKSYNPLQNIVKSDVYDIDTITNIAMSYGKDAM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHH
KIANEQNGHLAMYLTYLARAEIEALSIFKKYTYELSRDKNLRKQILKPYPWEESETNLNI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEE
NLSIWKFTESPIK
EEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA