Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228699

Identifier: 21228699

GI number: 21228699

Start: 3093786

End: 3094307

Strand: Reverse

Name: 21228699

Synonym: MM_2597

Alternate gene names: NA

Gene position: 3094307-3093786 (Counterclockwise)

Preceding gene: 21228700

Following gene: 21228698

Centisome position: 75.54

GC content: 45.98

Gene sequence:

>522_bases
ATGGCGCTGAACCTGATGTCCTTTGTCTTGAAAGATGTACCTTCACAGGAAATTGAAAAAATCATCGTTTCTGACAGGTT
TGCACAGTTCAAAATGAAAATCCCTGTGGTGCTTATAGGAGGCCCTGTAGTTGCCTATACAGAGGAATTGAACCGGATCC
TTGATGCCGATATTATAGTCCCCGAATATTCGGATGTTGGAAATGCCGTGGGAGCTGTCGTAGGAAAAGGCATAAAGAGG
GTTGAAATCCTCATCAAATCCGCCTATACTAAAGACAAAAAAAGGCTTGTCCTTCTCTTTTCCCCTCAGGGCAGGGAGAC
TTTCGGGAGTTATCCGGAAGCCCTGGAATATGCAGAGTCCCTGGGAAGAAGACTGGTAATGGAGTACATGACAGAAGCCG
GGCTTGACAAAGGGCGGGTTCAGATAGAAATGAGCAAAAAGGACATCGCTTTGAGTGAAGCAGGCACTATACCGGTAGAA
TCAAAACTCATTTTTGTCGGGATCGGGACGCCAAAAGTCTGA

Upstream 100 bases:

>100_bases
ATACGGAAGCGTCTATTGCCGGGGCAAAGCTTCTGGAACGCTATACTCATAAGGACTATATTGAGTCTGCAAGAGCATAA
AAAAAGACGTTGCAAGGGAC

Downstream 100 bases:

>100_bases
TTGCATACAGCAGCCGGAACTTTTATATTTTTTCCCTCAATAGTGCAAATAATATAAAATGGCCTACTCATAGGTTGCCA
GTTATTTAACATGACAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Hydantoinase; Dihydropyrimidinase

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIVPEYSDVGNAVGAVVGKGIKR
VEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAESLGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVE
SKLIFVGIGTPKV

Sequences:

>Translated_173_residues
MALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIVPEYSDVGNAVGAVVGKGIKR
VEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAESLGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVE
SKLIFVGIGTPKV
>Mature_172_residues
ALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIVPEYSDVGNAVGAVVGKGIKRV
EILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAESLGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVES
KLIFVGIGTPKV

Specific function: Unknown

COG id: COG0145

COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19050; Mature: 18918

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIV
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHCCCEEC
PEYSDVGNAVGAVVGKGIKRVEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAES
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHH
LGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVESKLIFVGIGTPKV
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
ALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIV
CHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHCCCEEC
PEYSDVGNAVGAVVGKGIKRVEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAES
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHH
LGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVESKLIFVGIGTPKV
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA