| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228699
Identifier: 21228699
GI number: 21228699
Start: 3093786
End: 3094307
Strand: Reverse
Name: 21228699
Synonym: MM_2597
Alternate gene names: NA
Gene position: 3094307-3093786 (Counterclockwise)
Preceding gene: 21228700
Following gene: 21228698
Centisome position: 75.54
GC content: 45.98
Gene sequence:
>522_bases ATGGCGCTGAACCTGATGTCCTTTGTCTTGAAAGATGTACCTTCACAGGAAATTGAAAAAATCATCGTTTCTGACAGGTT TGCACAGTTCAAAATGAAAATCCCTGTGGTGCTTATAGGAGGCCCTGTAGTTGCCTATACAGAGGAATTGAACCGGATCC TTGATGCCGATATTATAGTCCCCGAATATTCGGATGTTGGAAATGCCGTGGGAGCTGTCGTAGGAAAAGGCATAAAGAGG GTTGAAATCCTCATCAAATCCGCCTATACTAAAGACAAAAAAAGGCTTGTCCTTCTCTTTTCCCCTCAGGGCAGGGAGAC TTTCGGGAGTTATCCGGAAGCCCTGGAATATGCAGAGTCCCTGGGAAGAAGACTGGTAATGGAGTACATGACAGAAGCCG GGCTTGACAAAGGGCGGGTTCAGATAGAAATGAGCAAAAAGGACATCGCTTTGAGTGAAGCAGGCACTATACCGGTAGAA TCAAAACTCATTTTTGTCGGGATCGGGACGCCAAAAGTCTGA
Upstream 100 bases:
>100_bases ATACGGAAGCGTCTATTGCCGGGGCAAAGCTTCTGGAACGCTATACTCATAAGGACTATATTGAGTCTGCAAGAGCATAA AAAAAGACGTTGCAAGGGAC
Downstream 100 bases:
>100_bases TTGCATACAGCAGCCGGAACTTTTATATTTTTTCCCTCAATAGTGCAAATAATATAAAATGGCCTACTCATAGGTTGCCA GTTATTTAACATGACAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydantoinase; Dihydropyrimidinase
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIVPEYSDVGNAVGAVVGKGIKR VEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAESLGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVE SKLIFVGIGTPKV
Sequences:
>Translated_173_residues MALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIVPEYSDVGNAVGAVVGKGIKR VEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAESLGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVE SKLIFVGIGTPKV >Mature_172_residues ALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIVPEYSDVGNAVGAVVGKGIKRV EILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAESLGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVES KLIFVGIGTPKV
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19050; Mature: 18918
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHCCCEEC PEYSDVGNAVGAVVGKGIKRVEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAES CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHH LGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVESKLIFVGIGTPKV HHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure ALNLMSFVLKDVPSQEIEKIIVSDRFAQFKMKIPVVLIGGPVVAYTEELNRILDADIIV CHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCEEEECCCHHHHHHHHHHHHCCCEEC PEYSDVGNAVGAVVGKGIKRVEILIKSAYTKDKKRLVLLFSPQGRETFGSYPEALEYAES CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHH LGRRLVMEYMTEAGLDKGRVQIEMSKKDIALSEAGTIPVESKLIFVGIGTPKV HHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA