| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is feoB [C]
Identifier: 21228678
GI number: 21228678
Start: 3065982
End: 3067994
Strand: Reverse
Name: feoB [C]
Synonym: MM_2576
Alternate gene names: 21228678
Gene position: 3067994-3065982 (Counterclockwise)
Preceding gene: 21228679
Following gene: 21228677
Centisome position: 74.9
GC content: 47.09
Gene sequence:
>2013_bases TTGAAGGTGCGGAAATTGGTTGAGAATAAGATAAGGGTTGCACTTACAGGAAACCCCAATGTGGGAAAGACGACCATTTT CAATGCCATTACCGGAGCCAGGCAAAAGGTAGGAAACTGGCCAGGGGTAACAGTTGAGAAAAAAATAGGTACAAAGGCAT ATGGAGGACATGTCCTTGAAATTGTGGACCTTCCCGGCACCTACAGCCTTACAGCCTATTCCGCTGACGAGGTTGTTGCC AGGGATTACATCCTTGAAGAAAAACCTGATGTCGTAGTACAGGTCCTTGACTCGACAAATCTGGAACGCAATCTTTACCT GAGCACCCAGCTTCTGGAAATCGGCACGAACCTTATCCTTGCCCTCAACATGTCCGATCTTGCAGAAAAAAGGGGTGAAG GCTTAAACGCCCATGCGCTTGAGAAATTGCCTGAAGTCTCATTGATAAAAACAACCGCAAAAGAAAGCAAAGGTATCAAT GAACTCCTTGACGCAGTCATTTCAAAATCCGGCTCTGCCAGACCTTCCAATAATAAAATAGAGTACGGTGAAAAAATAGA GGAGAAAATCCGACATCTGGAACGGGTTCTGGCTGAAGATGAAACTCTTATGGCCAGGTATCCTTCCAGGTGGTTGAGCA TCAAACTGCTGGAAGGGGATGAAAATGCGCACTCAAAGCTAACTTCCTCAAAGATAGAGGCTGAAGTTAAAAAATTCCTT TCCGGCCTGAACACTGAAGAATACGAAGCCGAAATGGCTGATAAGCGTTATGAATTCATAAGCAAGCTCCTTCCTGAGGT GAGTAAGAGCCACGTTGAAATAATGTCAGGCTCGGATATGATTGATAAGGTGCTTACAAACAGGTACCTGGGGATCCCCA TATTCCTTGCCCTGATGTGGGGAATGTTTGAGCTGACATTTGCCTTCGCAACCCCTTTCATGGGAATTATTGAGATGTTT TTCGGCCTTCTTGCCGAAATAGTCACTGCAAACATAGATTCACCCTGGTTTTCATCCCTGCTTGCAGATGGGATAATTGC AGGAGCTGGATCTGTCATGCTCTTTGTCCCCAACATCTTCATCCTGTTCTTCCTCCTCGCTTTGCTGGAAGACAGCGGAT ATCTGGCAAGAGCAGCCTTTATCATGGACAGGCTGATGTATGCGATGGGAATTCAGGGAAAATCATTTATTCCGATGCTC ATGGGGTTCGGGTGTTCTGTCCCGGCTGTTATGGCAACCCGTACCCTTGAAGACAGAGCAGACCGCCTTATCACAATGAT GGTTACACCATTCATGTCCTGCGGAGCCAGGATGCCTGTTTACGTGCTGCTGGCAGGGACATTTTTCGGTAAACAGGCGG GATCCGTTATCTTCGGGATCTATGTGCTTGGAATTATTGTGGCAATAGTGTCTGCCAAGCTTTTCAGAACCATCATTTTC AAAGGCAGCCCGTCTGCCTTTATAATGGAACTTCCTCCCTACCACAGGCCTTCGGCTGTCAATTCTTTCAAGTACATGAT GAACCAGGGCTTCCTTTACCTCAAAAGAGCTGGTACCGTAATTGCTGGAGGAGTGATGGTTATATGGCTGCTTGCATACT TCCCTCAGGGAGTTGAATACGGAAGTGCGGAAAGCTACATCGGCAGCCTCGGGAAACTGCTCGAACCTCTGGTAGCACCT CTGGGTTTTGACTGGAAAATTGCAATTTCCCTCATATTCGGGTTCCTTGCCAAAGAGGTTGTCATAGGCTCCCTGGGAAC CCTTTACGGCACAGGAGCAGATGAAGGGATGCTATCTTCGGCGCTTGCCGCAGACCCGATATTTACACCTGCTGTTGCAC TCGGGCTTATGGTGTTTACCCTTCTTTACGTTCCCTGCATAGGAGCGGTTGCGGTAATCAAAAAAGAGTCGGGTTCCTGG AAATGGATGTTTTTTGCAGCCGCCTATTCGACAGCTGTGGCATGGATAATGGCATTTTTGACGGTAAAAATGGGAAATAT AGTGTTTGCATGA
Upstream 100 bases:
>100_bases ATAGGGTGCGAGAGAGGAAATCTGCTTGTTAATGTAAACGGAGCCAGATACGCCCTTGGAAAAGGAATGGCTATGAAAAT CATGGTAGAGCCGGATTCAT
Downstream 100 bases:
>100_bases GGAGCTGATGTGAATGGAAAATGAGAACAGAACCCTGACATGTTTTACTCTCCTCTGGGGGGCAACATACCTCGGAATCG GAGGCTTACAGGTCATGAAA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MKVRKLVENKIRVALTGNPNVGKTTIFNAITGARQKVGNWPGVTVEKKIGTKAYGGHVLEIVDLPGTYSLTAYSADEVVA RDYILEEKPDVVVQVLDSTNLERNLYLSTQLLEIGTNLILALNMSDLAEKRGEGLNAHALEKLPEVSLIKTTAKESKGIN ELLDAVISKSGSARPSNNKIEYGEKIEEKIRHLERVLAEDETLMARYPSRWLSIKLLEGDENAHSKLTSSKIEAEVKKFL SGLNTEEYEAEMADKRYEFISKLLPEVSKSHVEIMSGSDMIDKVLTNRYLGIPIFLALMWGMFELTFAFATPFMGIIEMF FGLLAEIVTANIDSPWFSSLLADGIIAGAGSVMLFVPNIFILFFLLALLEDSGYLARAAFIMDRLMYAMGIQGKSFIPML MGFGCSVPAVMATRTLEDRADRLITMMVTPFMSCGARMPVYVLLAGTFFGKQAGSVIFGIYVLGIIVAIVSAKLFRTIIF KGSPSAFIMELPPYHRPSAVNSFKYMMNQGFLYLKRAGTVIAGGVMVIWLLAYFPQGVEYGSAESYIGSLGKLLEPLVAP LGFDWKIAISLIFGFLAKEVVIGSLGTLYGTGADEGMLSSALAADPIFTPAVALGLMVFTLLYVPCIGAVAVIKKESGSW KWMFFAAAYSTAVAWIMAFLTVKMGNIVFA
Sequences:
>Translated_670_residues MKVRKLVENKIRVALTGNPNVGKTTIFNAITGARQKVGNWPGVTVEKKIGTKAYGGHVLEIVDLPGTYSLTAYSADEVVA RDYILEEKPDVVVQVLDSTNLERNLYLSTQLLEIGTNLILALNMSDLAEKRGEGLNAHALEKLPEVSLIKTTAKESKGIN ELLDAVISKSGSARPSNNKIEYGEKIEEKIRHLERVLAEDETLMARYPSRWLSIKLLEGDENAHSKLTSSKIEAEVKKFL SGLNTEEYEAEMADKRYEFISKLLPEVSKSHVEIMSGSDMIDKVLTNRYLGIPIFLALMWGMFELTFAFATPFMGIIEMF FGLLAEIVTANIDSPWFSSLLADGIIAGAGSVMLFVPNIFILFFLLALLEDSGYLARAAFIMDRLMYAMGIQGKSFIPML MGFGCSVPAVMATRTLEDRADRLITMMVTPFMSCGARMPVYVLLAGTFFGKQAGSVIFGIYVLGIIVAIVSAKLFRTIIF KGSPSAFIMELPPYHRPSAVNSFKYMMNQGFLYLKRAGTVIAGGVMVIWLLAYFPQGVEYGSAESYIGSLGKLLEPLVAP LGFDWKIAISLIFGFLAKEVVIGSLGTLYGTGADEGMLSSALAADPIFTPAVALGLMVFTLLYVPCIGAVAVIKKESGSW KWMFFAAAYSTAVAWIMAFLTVKMGNIVFA >Mature_670_residues MKVRKLVENKIRVALTGNPNVGKTTIFNAITGARQKVGNWPGVTVEKKIGTKAYGGHVLEIVDLPGTYSLTAYSADEVVA RDYILEEKPDVVVQVLDSTNLERNLYLSTQLLEIGTNLILALNMSDLAEKRGEGLNAHALEKLPEVSLIKTTAKESKGIN ELLDAVISKSGSARPSNNKIEYGEKIEEKIRHLERVLAEDETLMARYPSRWLSIKLLEGDENAHSKLTSSKIEAEVKKFL SGLNTEEYEAEMADKRYEFISKLLPEVSKSHVEIMSGSDMIDKVLTNRYLGIPIFLALMWGMFELTFAFATPFMGIIEMF FGLLAEIVTANIDSPWFSSLLADGIIAGAGSVMLFVPNIFILFFLLALLEDSGYLARAAFIMDRLMYAMGIQGKSFIPML MGFGCSVPAVMATRTLEDRADRLITMMVTPFMSCGARMPVYVLLAGTFFGKQAGSVIFGIYVLGIIVAIVSAKLFRTIIF KGSPSAFIMELPPYHRPSAVNSFKYMMNQGFLYLKRAGTVIAGGVMVIWLLAYFPQGVEYGSAESYIGSLGKLLEPLVAP LGFDWKIAISLIFGFLAKEVVIGSLGTLYGTGADEGMLSSALAADPIFTPAVALGLMVFTLLYVPCIGAVAVIKKESGSW KWMFFAAAYSTAVAWIMAFLTVKMGNIVFA
Specific function: Probable GTP-driven transporter of Fe(2+) ion [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=723, Percent_Identity=34.8547717842324, Blast_Score=370, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 73378; Mature: 73378
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRKLVENKIRVALTGNPNVGKTTIFNAITGARQKVGNWPGVTVEKKIGTKAYGGHVLE CCHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEE IVDLPGTYSLTAYSADEVVARDYILEEKPDVVVQVLDSTNLERNLYLSTQLLEIGTNLIL EEECCCCEEEEEECHHHHHHHHHHHCCCCCHHHEECCCCCCCCEEEHHHHHHHHCCCEEE ALNMSDLAEKRGEGLNAHALEKLPEVSLIKTTAKESKGINELLDAVISKSGSARPSNNKI EECHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC EYGEKIEEKIRHLERVLAEDETLMARYPSRWLSIKLLEGDENAHSKLTSSKIEAEVKKFL CCHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH SGLNTEEYEAEMADKRYEFISKLLPEVSKSHVEIMSGSDMIDKVLTNRYLGIPIFLALMW HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH GMFELTFAFATPFMGIIEMFFGLLAEIVTANIDSPWFSSLLADGIIAGAGSVMLFVPNIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH ILFFLLALLEDSGYLARAAFIMDRLMYAMGIQGKSFIPMLMGFGCSVPAVMATRTLEDRA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH DRLITMMVTPFMSCGARMPVYVLLAGTFFGKQAGSVIFGIYVLGIIVAIVSAKLFRTIIF HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC KGSPSAFIMELPPYHRPSAVNSFKYMMNQGFLYLKRAGTVIAGGVMVIWLLAYFPQGVEY CCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC GSAESYIGSLGKLLEPLVAPLGFDWKIAISLIFGFLAKEVVIGSLGTLYGTGADEGMLSS CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALAADPIFTPAVALGLMVFTLLYVPCIGAVAVIKKESGSWKWMFFAAAYSTAVAWIMAFL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHH TVKMGNIVFA HHHHCCEECC >Mature Secondary Structure MKVRKLVENKIRVALTGNPNVGKTTIFNAITGARQKVGNWPGVTVEKKIGTKAYGGHVLE CCHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEE IVDLPGTYSLTAYSADEVVARDYILEEKPDVVVQVLDSTNLERNLYLSTQLLEIGTNLIL EEECCCCEEEEEECHHHHHHHHHHHCCCCCHHHEECCCCCCCCEEEHHHHHHHHCCCEEE ALNMSDLAEKRGEGLNAHALEKLPEVSLIKTTAKESKGINELLDAVISKSGSARPSNNKI EECHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC EYGEKIEEKIRHLERVLAEDETLMARYPSRWLSIKLLEGDENAHSKLTSSKIEAEVKKFL CCHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH SGLNTEEYEAEMADKRYEFISKLLPEVSKSHVEIMSGSDMIDKVLTNRYLGIPIFLALMW HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH GMFELTFAFATPFMGIIEMFFGLLAEIVTANIDSPWFSSLLADGIIAGAGSVMLFVPNIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH ILFFLLALLEDSGYLARAAFIMDRLMYAMGIQGKSFIPMLMGFGCSVPAVMATRTLEDRA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH DRLITMMVTPFMSCGARMPVYVLLAGTFFGKQAGSVIFGIYVLGIIVAIVSAKLFRTIIF HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC KGSPSAFIMELPPYHRPSAVNSFKYMMNQGFLYLKRAGTVIAGGVMVIWLLAYFPQGVEY CCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC GSAESYIGSLGKLLEPLVAPLGFDWKIAISLIFGFLAKEVVIGSLGTLYGTGADEGMLSS CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALAADPIFTPAVALGLMVFTLLYVPCIGAVAVIKKESGSWKWMFFAAAYSTAVAWIMAFL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHH TVKMGNIVFA HHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]