| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228679
Identifier: 21228679
GI number: 21228679
Start: 3067972
End: 3068247
Strand: Reverse
Name: 21228679
Synonym: MM_2577
Alternate gene names: NA
Gene position: 3068247-3067972 (Counterclockwise)
Preceding gene: 21228680
Following gene: 21228678
Centisome position: 74.9
GC content: 48.19
Gene sequence:
>276_bases TTGAACAGATGGAGGGTTAATTTGCCCGCACAGATGCCTCTTACAATGCTCCAGGAAGGAAAAGGCTGCCGGATCAGCGA AGTTCGAGCAGGTGCTGAGCTCAGGAGAAGATTAATAGAGATGGGATTCACACCCTCGTCTTCTGTCCGGCTTATAGGGT GCGAGAGAGGAAATCTGCTTGTTAATGTAAACGGAGCCAGATACGCCCTTGGAAAAGGAATGGCTATGAAAATCATGGTA GAGCCGGATTCATTTGAAGGTGCGGAAATTGGTTGA
Upstream 100 bases:
>100_bases CTCAGTGTTAGCAAAAAAGCCCCGCTGGGAGACCCTGTAGATTTCAAGCTAAAAGGGTACAACCTGTCTCTCAGGAAAAA AGAAGCTGAGATGATAATTG
Downstream 100 bases:
>100_bases GAATAAGATAAGGGTTGCACTTACAGGAAACCCCAATGTGGGAAAGACGACCATTTTCAATGCCATTACCGGAGCCAGGC AAAAGGTAGGAAACTGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MNRWRVNLPAQMPLTMLQEGKGCRISEVRAGAELRRRLIEMGFTPSSSVRLIGCERGNLLVNVNGARYALGKGMAMKIMV EPDSFEGAEIG
Sequences:
>Translated_91_residues MNRWRVNLPAQMPLTMLQEGKGCRISEVRAGAELRRRLIEMGFTPSSSVRLIGCERGNLLVNVNGARYALGKGMAMKIMV EPDSFEGAEIG >Mature_91_residues MNRWRVNLPAQMPLTMLQEGKGCRISEVRAGAELRRRLIEMGFTPSSSVRLIGCERGNLLVNVNGARYALGKGMAMKIMV EPDSFEGAEIG
Specific function: Unknown
COG id: COG1918
COG function: function code P; Fe2+ transport system protein A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10038; Mature: 10038
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRWRVNLPAQMPLTMLQEGKGCRISEVRAGAELRRRLIEMGFTPSSSVRLIGCERGNLL CCCEEECCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCEE VNVNGARYALGKGMAMKIMVEPDSFEGAEIG EEECCCEEECCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MNRWRVNLPAQMPLTMLQEGKGCRISEVRAGAELRRRLIEMGFTPSSSVRLIGCERGNLL CCCEEECCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCEE VNVNGARYALGKGMAMKIMVEPDSFEGAEIG EEECCCEEECCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA