Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is mntR [H]

Identifier: 21228675

GI number: 21228675

Start: 3064215

End: 3064700

Strand: Reverse

Name: mntR [H]

Synonym: MM_2573

Alternate gene names: 21228675

Gene position: 3064700-3064215 (Counterclockwise)

Preceding gene: 21228676

Following gene: 21228666

Centisome position: 74.82

GC content: 40.95

Gene sequence:

>486_bases
ATGACTACAGAAAGAGATGAAGACTACCTGAAAATTATCGCCTCAATTGTGGAAGAAAAAGGATACGCAAAAGTTAAAGA
TGTAGCGAAAGAGCTTGAACTCGGCCCCTCTACTGTAACAGGTATGTTCAAAAAACTGGATAAAGAAGGCTATATAAATT
ATGAAAAGTATGGCGGAGTAACCCTTACTGAAAAAGGGACGGAAATCGCCAGAAAGACAAGAGAAAAATACAGCATGCTC
AAAGAATTTCTCATGCACCTGGGGCTTGATGAAAAGACGGCAGAAGAAGACGCCTGCAAGATTGAGCACATCCTTGACCC
AAAAACTGCGAAAATCCTGAAAAAGTTTGTGGAATTCACGGATAAAGAAGACGAGTCAAGAATCTGGATAGAGCATTTCA
GGTATTTTGTCGAGACCGGAAAATATATATATTACTCCCCCGAAAACCGCGACAAATGCCCTGTCCACGGAAAAAAAACG
GACTGA

Upstream 100 bases:

>100_bases
TTTATTTTTTTGCTTACCGTACAGCTATCCTTATATGTCTTTCCCGCATAATTGAATATAATCGAAAAATATTCGGCATA
CAAAAAAAGGTTCGAGTTTT

Downstream 100 bases:

>100_bases
TTTTATCAGGGCAGTCAGCTTTGCAAAAAGTCCTTTGACAGTTCCTGTTTGAAGGAACCGTCATGAACTTTCATATGCAG
ATTTATAATATTTATTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Manganese transport regulator [H]

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGVTLTEKGTEIARKTREKYSML
KEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFTDKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKT
D

Sequences:

>Translated_161_residues
MTTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGVTLTEKGTEIARKTREKYSML
KEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFTDKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKT
D
>Mature_160_residues
TTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGVTLTEKGTEIARKTREKYSMLK
EFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFTDKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKTD

Specific function: Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon [H]

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787038, Length=116, Percent_Identity=33.6206896551724, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR022687
- InterPro:   IPR022897
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]

EC number: NA

Molecular weight: Translated: 18836; Mature: 18705

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50944 HTH_DTXR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGV
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCE
TLTEKGTEIARKTREKYSMLKEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFT
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC
DKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKTD
CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGV
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCE
TLTEKGTEIARKTREKYSMLKEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFT
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC
DKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKTD
CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA