| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mntR [H]
Identifier: 21228675
GI number: 21228675
Start: 3064215
End: 3064700
Strand: Reverse
Name: mntR [H]
Synonym: MM_2573
Alternate gene names: 21228675
Gene position: 3064700-3064215 (Counterclockwise)
Preceding gene: 21228676
Following gene: 21228666
Centisome position: 74.82
GC content: 40.95
Gene sequence:
>486_bases ATGACTACAGAAAGAGATGAAGACTACCTGAAAATTATCGCCTCAATTGTGGAAGAAAAAGGATACGCAAAAGTTAAAGA TGTAGCGAAAGAGCTTGAACTCGGCCCCTCTACTGTAACAGGTATGTTCAAAAAACTGGATAAAGAAGGCTATATAAATT ATGAAAAGTATGGCGGAGTAACCCTTACTGAAAAAGGGACGGAAATCGCCAGAAAGACAAGAGAAAAATACAGCATGCTC AAAGAATTTCTCATGCACCTGGGGCTTGATGAAAAGACGGCAGAAGAAGACGCCTGCAAGATTGAGCACATCCTTGACCC AAAAACTGCGAAAATCCTGAAAAAGTTTGTGGAATTCACGGATAAAGAAGACGAGTCAAGAATCTGGATAGAGCATTTCA GGTATTTTGTCGAGACCGGAAAATATATATATTACTCCCCCGAAAACCGCGACAAATGCCCTGTCCACGGAAAAAAAACG GACTGA
Upstream 100 bases:
>100_bases TTTATTTTTTTGCTTACCGTACAGCTATCCTTATATGTCTTTCCCGCATAATTGAATATAATCGAAAAATATTCGGCATA CAAAAAAAGGTTCGAGTTTT
Downstream 100 bases:
>100_bases TTTTATCAGGGCAGTCAGCTTTGCAAAAAGTCCTTTGACAGTTCCTGTTTGAAGGAACCGTCATGAACTTTCATATGCAG ATTTATAATATTTATTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Manganese transport regulator [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGVTLTEKGTEIARKTREKYSML KEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFTDKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKT D
Sequences:
>Translated_161_residues MTTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGVTLTEKGTEIARKTREKYSML KEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFTDKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKT D >Mature_160_residues TTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGVTLTEKGTEIARKTREKYSMLK EFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFTDKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKTD
Specific function: Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon [H]
COG id: COG1321
COG function: function code K; Mn-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787038, Length=116, Percent_Identity=33.6206896551724, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001367 - InterPro: IPR022689 - InterPro: IPR022687 - InterPro: IPR022897 - InterPro: IPR011991 [H]
Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]
EC number: NA
Molecular weight: Translated: 18836; Mature: 18705
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS50944 HTH_DTXR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGV CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCE TLTEKGTEIARKTREKYSMLKEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFT EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC DKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKTD CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TTERDEDYLKIIASIVEEKGYAKVKDVAKELELGPSTVTGMFKKLDKEGYINYEKYGGV CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCE TLTEKGTEIARKTREKYSMLKEFLMHLGLDEKTAEEDACKIEHILDPKTAKILKKFVEFT EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC DKEDESRIWIEHFRYFVETGKYIYYSPENRDKCPVHGKKTD CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA