| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228676
Identifier: 21228676
GI number: 21228676
Start: 3065166
End: 3065477
Strand: Reverse
Name: 21228676
Synonym: MM_2574
Alternate gene names: NA
Gene position: 3065477-3065166 (Counterclockwise)
Preceding gene: 21228677
Following gene: 21228675
Centisome position: 74.83
GC content: 43.27
Gene sequence:
>312_bases ATGGTACTCGGATACATGTATGTGTTAAAACAGATAGCGGAAGTGGAAAATAAAGGCAATATGTCTTTCAATGAGATATC GGGACATTTGAAAATGAGTACGCAGCAGCTTAGAGGCTTACTCGAAATAATGGAAAGAATGGGACATATTGAAAAAGTTA CGGACAACAGTTCCGTCTTATCCTCTTCCTGTCCCGGCTCCTGCAAAAATTGTGGATGTTGCGGGTTTTTAGAAAAACCC ACCGTTTCAACAGGCACGGTTTACAGGCTGACCGAGAAGGGAAAAAGAGTCTGTCACAGCCAGACCGGCTAA
Upstream 100 bases:
>100_bases CCCTGGCAGTATACACAGCAGGGGGAAAAACGTTCAGGCTACAGGATTCAGAAGGAATTACAGAATAAGAAAAAATTTGG GGATATGGAGAAAACAGATT
Downstream 100 bases:
>100_bases CCTGAAAAATCCTGATGAACAAAACAGGAGATTTCAAAACCCGGGCGCAGCCTCCCTGACCTTAAATGTGCATAAACAGA CCAGAAAGCGAACAAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MVLGYMYVLKQIAEVENKGNMSFNEISGHLKMSTQQLRGLLEIMERMGHIEKVTDNSSVLSSSCPGSCKNCGCCGFLEKP TVSTGTVYRLTEKGKRVCHSQTG
Sequences:
>Translated_103_residues MVLGYMYVLKQIAEVENKGNMSFNEISGHLKMSTQQLRGLLEIMERMGHIEKVTDNSSVLSSSCPGSCKNCGCCGFLEKP TVSTGTVYRLTEKGKRVCHSQTG >Mature_103_residues MVLGYMYVLKQIAEVENKGNMSFNEISGHLKMSTQQLRGLLEIMERMGHIEKVTDNSSVLSSSCPGSCKNCGCCGFLEKP TVSTGTVYRLTEKGKRVCHSQTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11323; Mature: 11323
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 11.7 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 11.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLGYMYVLKQIAEVENKGNMSFNEISGHLKMSTQQLRGLLEIMERMGHIEKVTDNSSVL CCHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SSSCPGSCKNCGCCGFLEKPTVSTGTVYRLTEKGKRVCHSQTG CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCC >Mature Secondary Structure MVLGYMYVLKQIAEVENKGNMSFNEISGHLKMSTQQLRGLLEIMERMGHIEKVTDNSSVL CCHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SSSCPGSCKNCGCCGFLEKPTVSTGTVYRLTEKGKRVCHSQTG CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA