| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228634
Identifier: 21228634
GI number: 21228634
Start: 3018647
End: 3019888
Strand: Reverse
Name: 21228634
Synonym: MM_2532
Alternate gene names: NA
Gene position: 3019888-3018647 (Counterclockwise)
Preceding gene: 21228635
Following gene: 21228633
Centisome position: 73.72
GC content: 44.04
Gene sequence:
>1242_bases GTGGATTTCCTGACAAAACTTGCCATTGCATTTTTAATAGGGATAATGGTAGGTGTGGAAAGGGAACACAGAGGGCTTGA GCACGAGATTTTTGCAGGAGTCAGGAGTTACAGTATAACCTGCATAACGGGTATGCTCGTAGCTCTGGCAAGCGAATCCA TAGGAACAGGCTTTGTTTACGTATCCACGCTTTTCTTTGCGGCTATGTGTTCCATAATCACCTATTCCAAAATATTCCTT TTCAAGAGGATAGGGGTTACAAGCCCCATTACTTTATTTTTTATTTTCGTGATGGGAGTCCTTGTAGGCTATGACTACGG CCTCTTTGCCATTGTTTCTTCAATAGTCGTAGCTTTCCTGCTTATCCAGAAACAGCCCCTCCACCAGTTTGCAGGAAACC TTACAAAAGAAGAGCTTTACAATGCCATACAGTTTCTGGCTGTCGCTTTCATACTTTATCCGGTTATGCCGGAAAAACAG TTCTTCGGGCTTCTAAACCTCAGATACGCGATCCTTATTGTAATTCTTGTTTCTCTGATCAGCTTTTCAAGTTATGTTCT TTTGAGAAAATTCGGGACAAAGCGTGGCCTTTATTATTCGGGCTTTCTCGGGGGCTTTATTAACAGTGAAGCCACCACAG GAGCGCTGGCGGGACTTTCAAAGAAGGCAGAGGAAATGGCTGCCCCGGTTATTACAGGGATCCTGCTCTGCAATATTTCC ATGCTCATTCGGAACCTTGTTCTGGCGTTTATAGTTGACCCGACTGGCAGGACAACCATGCTTATGCTCCTTCCCCAGCT TGTACTTATTATAGTTTCAATTGGAATGGCTTACAGGCACAGCAAGAAGGTCTGCCCGATAGGCGGGGGAGAACTCAAGA TCCAGTCTCCTTTCTCACTGGGCCAGGCATTTAAGTTTGGCATTGCTTTTACTCTGATCCTCGTTATAGGGAACTTTGCC TATAATGCTGCAGGGACTACAGGAATATACCTGACTGCCCTTGGTGCTCTTGTAAGCAGTTCAGGAGTGATAGTCTCCGT AACTCTTCTTGCCGTAAGTGGGAATATTTCTTACGAAGTCGCAGCAAATACAGCAGTAATTGCAAGCCTTGTAAGTACTG TAAATAAAATTCTGCTTTCGAAGATTTCAGGCTCTTCAAGTCTCTTTTCTCTTGCCATAAAGGATTTTGGGATCATTGCA GCCACAGGAACTCTGGCTTTAGTTATATTGAATTTTCTGTGA
Upstream 100 bases:
>100_bases AGTTAAATATGCTATTTTGCCGGCGTGCAGAATTATATAGAAAAAGCTGAGGGGTTGAACTACGGACGTAATCAAAGATT TCGGTTTCGATCCAGTCTTT
Downstream 100 bases:
>100_bases GATCGAATTCTGTAAGTCGAATTTCTATGAAATCGAATTCAGTAAGGCCGAATATTCTATAAAATCGAATTCAGTAAGGT CGAATATTCTGTAAGATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Magnesium Transporter Accessory Protein; Transmembrane Protein; MgtC Family Protein; Mg2+ Transporter-C Family Protein; MgtC Family Membrane Protein; Mgtc/Sapb Transporter
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVYVSTLFFAAMCSIITYSKIFL FKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFLLIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQ FFGLLNLRYAILIVILVSLISFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSLGQAFKFGIAFTLILVIGNFA YNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEVAANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIA ATGTLALVILNFL
Sequences:
>Translated_413_residues MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVYVSTLFFAAMCSIITYSKIFL FKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFLLIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQ FFGLLNLRYAILIVILVSLISFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSLGQAFKFGIAFTLILVIGNFA YNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEVAANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIA ATGTLALVILNFL >Mature_413_residues MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVYVSTLFFAAMCSIITYSKIFL FKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFLLIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQ FFGLLNLRYAILIVILVSLISFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSLGQAFKFGIAFTLILVIGNFA YNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEVAANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIA ATGTLALVILNFL
Specific function: Unknown
COG id: COG3174
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44294; Mature: 44294
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVY CCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VSTLFFAAMCSIITYSKIFLFKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQFFGLLNLRYAILIVILVSLI HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS HHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH GQAFKFGIAFTLILVIGNFAYNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEE AANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIAATGTLALVILNFL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MDFLTKLAIAFLIGIMVGVEREHRGLEHEIFAGVRSYSITCITGMLVALASESIGTGFVY CCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VSTLFFAAMCSIITYSKIFLFKRIGVTSPITLFFIFVMGVLVGYDYGLFAIVSSIVVAFL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIQKQPLHQFAGNLTKEELYNAIQFLAVAFILYPVMPEKQFFGLLNLRYAILIVILVSLI HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SFSSYVLLRKFGTKRGLYYSGFLGGFINSEATTGALAGLSKKAEEMAAPVITGILLCNIS HHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLIRNLVLAFIVDPTGRTTMLMLLPQLVLIIVSIGMAYRHSKKVCPIGGGELKIQSPFSL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHH GQAFKFGIAFTLILVIGNFAYNAAGTTGIYLTALGALVSSSGVIVSVTLLAVSGNISYEV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEE AANTAVIASLVSTVNKILLSKISGSSSLFSLAIKDFGIIAATGTLALVILNFL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA