Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228635

Identifier: 21228635

GI number: 21228635

Start: 3020347

End: 3021033

Strand: Reverse

Name: 21228635

Synonym: MM_2533

Alternate gene names: NA

Gene position: 3021033-3020347 (Counterclockwise)

Preceding gene: 21228648

Following gene: 21228634

Centisome position: 73.75

GC content: 48.47

Gene sequence:

>687_bases
TTGAAAATTCAAAATAAGGACGAGATAAGGATGAAGATACTCGCTATTTCCGACCCACATGGAGACTATTCGAAGATTGA
AGAGATCATAGAAAAAGCCGGGGACTTTGACCTGGCTGTTGTGGTCGGGGACATAACCAACTTCGGACCCGATGAGAAAG
TAGATGAGCTGCTTGGGATGTTTGATAAGCCCGTGCTTGCAATCCCCGGGAACTGCGACCACAGGAGCATCCTGAAAGCC
CTTGACAGTTCAAAAGCCGTAAACCTTCACGGAAAAGCCGAACAGGTTGGAAAAATCAGGTTCATAGGGCTTGGAGGCTC
AAACCCTACCCCTTTTAACACCCCTTTTGAGCTTTCCGAAGAAGAAATAGAAAACGCCCTTGAAGGAATGGTCTGCTCAG
CCGAAAACTCAGGGGAATGCGGGAAAATAGTGCTCCTTACACACGCTCCTCCGCATGGAGCCAGAGACGAACTCCCATTC
GGGCATGTGGGAAGCAAAGCGATCCAGAAGTTTATTGACAGGGTAGACCTGATCGTCTGCGGGCACATCCATGAAGCAAA
AGGCATGGAAAAAGCCGGGAAAACACTTGTGGTAAATCCCGGAGAAGCCTGCAAGGGTTCCTGTGCTCTTATAACCATTG
AAGAGACCGAAAACAAACCCATCGAGGTTGAGTTCGTGGAAGTATAA

Upstream 100 bases:

>100_bases
TCACAGAAGAACACATGACATAATATGAGAAAGAGATAATATTTAAGACTCGATAGAGAATAAAACCAGAGTAAAGAGTC
ATGATTAAACGATAAGTGGA

Downstream 100 bases:

>100_bases
ATAAGATCCAAATGGCTTAATAAGATATAAACGGTTTAATAAGATTCAAATGGCTTAGTAAGATTCAAATGGCTTAGTAA
GATTTAAACGGCTTAAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGMFDKPVLAIPGNCDHRSILKA
LDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSEEEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPF
GHVGSKAIQKFIDRVDLIVCGHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV

Sequences:

>Translated_228_residues
MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGMFDKPVLAIPGNCDHRSILKA
LDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSEEEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPF
GHVGSKAIQKFIDRVDLIVCGHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV
>Mature_228_residues
MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGMFDKPVLAIPGNCDHRSILKA
LDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSEEEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPF
GHVGSKAIQKFIDRVDLIVCGHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV

Specific function: Unknown

COG id: COG2129

COG function: function code R; Predicted phosphoesterases, related to the Icc protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 24667; Mature: 24667

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGM
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHH
FDKPVLAIPGNCDHRSILKALDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSE
CCCCEEEECCCCCHHHHHHHHCCCCEEEECCCHHCCCCEEEEEECCCCCCCCCCCCCCCH
EEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPFGHVGSKAIQKFIDRVDLIVC
HHHHHHHHCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEE
GHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV
CCCHHHCCHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGM
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHH
FDKPVLAIPGNCDHRSILKALDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSE
CCCCEEEECCCCCHHHHHHHHCCCCEEEECCCHHCCCCEEEEEECCCCCCCCCCCCCCCH
EEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPFGHVGSKAIQKFIDRVDLIVC
HHHHHHHHCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEE
GHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV
CCCHHHCCHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]