| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228635
Identifier: 21228635
GI number: 21228635
Start: 3020347
End: 3021033
Strand: Reverse
Name: 21228635
Synonym: MM_2533
Alternate gene names: NA
Gene position: 3021033-3020347 (Counterclockwise)
Preceding gene: 21228648
Following gene: 21228634
Centisome position: 73.75
GC content: 48.47
Gene sequence:
>687_bases TTGAAAATTCAAAATAAGGACGAGATAAGGATGAAGATACTCGCTATTTCCGACCCACATGGAGACTATTCGAAGATTGA AGAGATCATAGAAAAAGCCGGGGACTTTGACCTGGCTGTTGTGGTCGGGGACATAACCAACTTCGGACCCGATGAGAAAG TAGATGAGCTGCTTGGGATGTTTGATAAGCCCGTGCTTGCAATCCCCGGGAACTGCGACCACAGGAGCATCCTGAAAGCC CTTGACAGTTCAAAAGCCGTAAACCTTCACGGAAAAGCCGAACAGGTTGGAAAAATCAGGTTCATAGGGCTTGGAGGCTC AAACCCTACCCCTTTTAACACCCCTTTTGAGCTTTCCGAAGAAGAAATAGAAAACGCCCTTGAAGGAATGGTCTGCTCAG CCGAAAACTCAGGGGAATGCGGGAAAATAGTGCTCCTTACACACGCTCCTCCGCATGGAGCCAGAGACGAACTCCCATTC GGGCATGTGGGAAGCAAAGCGATCCAGAAGTTTATTGACAGGGTAGACCTGATCGTCTGCGGGCACATCCATGAAGCAAA AGGCATGGAAAAAGCCGGGAAAACACTTGTGGTAAATCCCGGAGAAGCCTGCAAGGGTTCCTGTGCTCTTATAACCATTG AAGAGACCGAAAACAAACCCATCGAGGTTGAGTTCGTGGAAGTATAA
Upstream 100 bases:
>100_bases TCACAGAAGAACACATGACATAATATGAGAAAGAGATAATATTTAAGACTCGATAGAGAATAAAACCAGAGTAAAGAGTC ATGATTAAACGATAAGTGGA
Downstream 100 bases:
>100_bases ATAAGATCCAAATGGCTTAATAAGATATAAACGGTTTAATAAGATTCAAATGGCTTAGTAAGATTCAAATGGCTTAGTAA GATTTAAACGGCTTAAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGMFDKPVLAIPGNCDHRSILKA LDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSEEEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPF GHVGSKAIQKFIDRVDLIVCGHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV
Sequences:
>Translated_228_residues MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGMFDKPVLAIPGNCDHRSILKA LDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSEEEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPF GHVGSKAIQKFIDRVDLIVCGHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV >Mature_228_residues MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGMFDKPVLAIPGNCDHRSILKA LDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSEEEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPF GHVGSKAIQKFIDRVDLIVCGHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV
Specific function: Unknown
COG id: COG2129
COG function: function code R; Predicted phosphoesterases, related to the Icc protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 24667; Mature: 24667
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGM CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHH FDKPVLAIPGNCDHRSILKALDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSE CCCCEEEECCCCCHHHHHHHHCCCCEEEECCCHHCCCCEEEEEECCCCCCCCCCCCCCCH EEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPFGHVGSKAIQKFIDRVDLIVC HHHHHHHHCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEE GHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV CCCHHHCCHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEC >Mature Secondary Structure MKIQNKDEIRMKILAISDPHGDYSKIEEIIEKAGDFDLAVVVGDITNFGPDEKVDELLGM CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHH FDKPVLAIPGNCDHRSILKALDSSKAVNLHGKAEQVGKIRFIGLGGSNPTPFNTPFELSE CCCCEEEECCCCCHHHHHHHHCCCCEEEECCCHHCCCCEEEEEECCCCCCCCCCCCCCCH EEIENALEGMVCSAENSGECGKIVLLTHAPPHGARDELPFGHVGSKAIQKFIDRVDLIVC HHHHHHHHCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEE GHIHEAKGMEKAGKTLVVNPGEACKGSCALITIEETENKPIEVEFVEV CCCHHHCCHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]