| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is trkG [H]
Identifier: 21228604
GI number: 21228604
Start: 2982304
End: 2983734
Strand: Reverse
Name: trkG [H]
Synonym: MM_2502
Alternate gene names: 21228604
Gene position: 2983734-2982304 (Counterclockwise)
Preceding gene: 21228605
Following gene: 21228603
Centisome position: 72.84
GC content: 45.14
Gene sequence:
>1431_bases GTGAATAAAAAAGCTATTTATAATGCGCTTGGGAAAATTCTTATACTTCTGGCTTTTACAATGCTCGTTCCTCTTTTAGT GGCTTTTTATTATGGGGAACCTCTGAAACCGTTTACGGTTTCCATTCTCATAACCTTTCTTGCCGGTTTGCTCCTTACAC GCATCAAGAGCAGTGCTGAATGGCAGCAGAAAGAAGCCCTTGCCATTGTGGCTCTGACCTGGCTTTCAGCAGCTATTTTT GGAGGGATCCCTTTCCTTTTCGAGGGCGTATCCTTCATTGATGCCGTGTTTGAAACAATGTCGGGTTTCACGTCAACGGG TTCGACTATTTTTGTGGATATTGAGAGTTATTCCAGGAGTCTTCTTTTCTGGCGTTCTTTTACGCAGTGGCTGGGCGGTA TGGGTATTATTGTGCTTTTCATTGCTATCCTGCCAAAACTCGGAGTTGCGGGGCGCCAGCTTTTCCGGGCAGAAGCTCCG GGCCCTACAGAAGATAAGCTCAAGCCAAGGATAAAAGATACGGCAAAGATCCTGTGGGCGCTTTATGTCCTGATCTCTGC CGTTGAAGTTGTGGCACTGATGCTTGCAGGAATGTCCCTGTATGACGCCCTCACGCACACTTTTGCAGGCATGGCATGTG GAGGCTATTCCCCTTATGGTCTGGGGATTGAAGCTTTTAACAGCCCTCTTATAGAATTTATTCTCACATTTTTTATGTTC GCAGCCGGAGCGAACTTTGCCCTGTATTACAGGGCGATTTTTATTGACAGTAACTTTCTTCTTAAAGATGAGGAGTTCAG GGCTTATACCTTTATTCTCCTGGGATTTTCAGGCCTTCTCACCCTGGTTCTGTACAAAGATATGGATTTTTCCCTTTTCA ATTCTTTCCGTTACGCCATATTCCAGATTACCTCTATCATGACGGCTACGGGCTTTGCTTCAACTGATTTTAACCTCTGG ACAGATTCGGCAAAGGTCCTGGTTTTTGCGGTCATGTTTATAGGCGGCTGTGCAGGCTCCACCGGGGGAGGCATGAAGGT CGTGCGTTTTCTGCTGATGTTAAAGTATGCGAGGAGAGAGCTGTTTAAATTTGTTCATCCAAGGCTTATAAGGCCCATCA GATTCAATAACAAAGCAGTGCCTGATGATGTTTTACAGTCCATCCTGTCCTTTGTTGTGATTTACATATTAGTTTTTATC TTCAGTGCAATGTTCCTGACTCTGCTTGGAGTCGACATGATCAGTTCTGCTACCGCTTCGATTGCAACCCTTGGAAATAT AGGACCTGGTTTTAACGTAGTCGGACCTATGGCAAACTTTTCAGCACTCCCTCCCCTGGGAAAAATTATCCTGATAAATA ATATGTGGGTCGGAAGGCTTGAGGTTTATACCGTACTGGTACTCTTCACAAGCGATTTCTGGCATTCCTGA
Upstream 100 bases:
>100_bases GTGTAGTTATTTTCTCAATGGCTTCGGCAGCATCGGAAGTAGAAAAATATTTCAAGTAAGAAAATATTTCAAGTAAGTTT TACGGGACAGGGGTTTTTCT
Downstream 100 bases:
>100_bases ACAAAATTTCATTAAAGGCATACAATAGATGTGCCTGAAGTTGTCAGGCATCTGTGTTTTCCACTCATGCTTTTCCTGTA AATGCACCTGAATTCAGTCT
Product: Trk system potassium uptake protein
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MNKKAIYNALGKILILLAFTMLVPLLVAFYYGEPLKPFTVSILITFLAGLLLTRIKSSAEWQQKEALAIVALTWLSAAIF GGIPFLFEGVSFIDAVFETMSGFTSTGSTIFVDIESYSRSLLFWRSFTQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAP GPTEDKLKPRIKDTAKILWALYVLISAVEVVALMLAGMSLYDALTHTFAGMACGGYSPYGLGIEAFNSPLIEFILTFFMF AAGANFALYYRAIFIDSNFLLKDEEFRAYTFILLGFSGLLTLVLYKDMDFSLFNSFRYAIFQITSIMTATGFASTDFNLW TDSAKVLVFAVMFIGGCAGSTGGGMKVVRFLLMLKYARRELFKFVHPRLIRPIRFNNKAVPDDVLQSILSFVVIYILVFI FSAMFLTLLGVDMISSATASIATLGNIGPGFNVVGPMANFSALPPLGKIILINNMWVGRLEVYTVLVLFTSDFWHS
Sequences:
>Translated_476_residues MNKKAIYNALGKILILLAFTMLVPLLVAFYYGEPLKPFTVSILITFLAGLLLTRIKSSAEWQQKEALAIVALTWLSAAIF GGIPFLFEGVSFIDAVFETMSGFTSTGSTIFVDIESYSRSLLFWRSFTQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAP GPTEDKLKPRIKDTAKILWALYVLISAVEVVALMLAGMSLYDALTHTFAGMACGGYSPYGLGIEAFNSPLIEFILTFFMF AAGANFALYYRAIFIDSNFLLKDEEFRAYTFILLGFSGLLTLVLYKDMDFSLFNSFRYAIFQITSIMTATGFASTDFNLW TDSAKVLVFAVMFIGGCAGSTGGGMKVVRFLLMLKYARRELFKFVHPRLIRPIRFNNKAVPDDVLQSILSFVVIYILVFI FSAMFLTLLGVDMISSATASIATLGNIGPGFNVVGPMANFSALPPLGKIILINNMWVGRLEVYTVLVLFTSDFWHS >Mature_476_residues MNKKAIYNALGKILILLAFTMLVPLLVAFYYGEPLKPFTVSILITFLAGLLLTRIKSSAEWQQKEALAIVALTWLSAAIF GGIPFLFEGVSFIDAVFETMSGFTSTGSTIFVDIESYSRSLLFWRSFTQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAP GPTEDKLKPRIKDTAKILWALYVLISAVEVVALMLAGMSLYDALTHTFAGMACGGYSPYGLGIEAFNSPLIEFILTFFMF AAGANFALYYRAIFIDSNFLLKDEEFRAYTFILLGFSGLLTLVLYKDMDFSLFNSFRYAIFQITSIMTATGFASTDFNLW TDSAKVLVFAVMFIGGCAGSTGGGMKVVRFLLMLKYARRELFKFVHPRLIRPIRFNNKAVPDDVLQSILSFVVIYILVFI FSAMFLTLLGVDMISSATASIATLGNIGPGFNVVGPMANFSALPPLGKIILINNMWVGRLEVYTVLVLFTSDFWHS
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA and requires trkE for transport activity [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI48994987, Length=485, Percent_Identity=40.6185567010309, Blast_Score=301, Evalue=4e-83, Organism=Escherichia coli, GI1787626, Length=483, Percent_Identity=32.5051759834368, Blast_Score=270, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 52680; Mature: 52680
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKAIYNALGKILILLAFTMLVPLLVAFYYGEPLKPFTVSILITFLAGLLLTRIKSSAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQQKEALAIVALTWLSAAIFGGIPFLFEGVSFIDAVFETMSGFTSTGSTIFVDIESYSRS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH LLFWRSFTQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAPGPTEDKLKPRIKDTAKILWA HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHH LYVLISAVEVVALMLAGMSLYDALTHTFAGMACGGYSPYGLGIEAFNSPLIEFILTFFMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHH AAGANFALYYRAIFIDSNFLLKDEEFRAYTFILLGFSGLLTLVLYKDMDFSLFNSFRYAI HCCCCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FQITSIMTATGFASTDFNLWTDSAKVLVFAVMFIGGCAGSTGGGMKVVRFLLMLKYARRE HHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LFKFVHPRLIRPIRFNNKAVPDDVLQSILSFVVIYILVFIFSAMFLTLLGVDMISSATAS HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLGNIGPGFNVVGPMANFSALPPLGKIILINNMWVGRLEVYTVLVLFTSDFWHS HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKKAIYNALGKILILLAFTMLVPLLVAFYYGEPLKPFTVSILITFLAGLLLTRIKSSAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WQQKEALAIVALTWLSAAIFGGIPFLFEGVSFIDAVFETMSGFTSTGSTIFVDIESYSRS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH LLFWRSFTQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAPGPTEDKLKPRIKDTAKILWA HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHH LYVLISAVEVVALMLAGMSLYDALTHTFAGMACGGYSPYGLGIEAFNSPLIEFILTFFMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHH AAGANFALYYRAIFIDSNFLLKDEEFRAYTFILLGFSGLLTLVLYKDMDFSLFNSFRYAI HCCCCCEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FQITSIMTATGFASTDFNLWTDSAKVLVFAVMFIGGCAGSTGGGMKVVRFLLMLKYARRE HHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LFKFVHPRLIRPIRFNNKAVPDDVLQSILSFVVIYILVFIFSAMFLTLLGVDMISSATAS HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLGNIGPGFNVVGPMANFSALPPLGKIILINNMWVGRLEVYTVLVLFTSDFWHS HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]