| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is trkG [H]
Identifier: 21228602
GI number: 21228602
Start: 2979085
End: 2980515
Strand: Reverse
Name: trkG [H]
Synonym: MM_2500
Alternate gene names: 21228602
Gene position: 2980515-2979085 (Counterclockwise)
Preceding gene: 21228603
Following gene: 21228593
Centisome position: 72.76
GC content: 45.0
Gene sequence:
>1431_bases ATGAATATTAAGATTGTTTTTTATGTGCTTGGCGGTTTACTCAGGCTTCTCGGGATAATCATGGTTGTTCCTCTCGGAGT TGCGTACTACTATGGAGAAGATCTGACTCCGTTTCTTGTATCTATAGCAATAACCGTTATTACAGGCCTGATCCTTCTTT CCTACAAAACTGATGAAGAATGGATGCGCAAAGAAGGCTTTGCAATCGTTGGACTGGGCTGGCTTATTGCTGCGGTTTTT GGAGCAATCCCTTTTGTGCTTGACGGGATTTCCCCGCTTAACGCCCTTTTTGAATCCATGTCAGCCTTTACCACCACAGG CTCGACAATCCTCACGGATATAGAAAGCCACCCTAAAGGAATCCTTTTCTGGCGAGGCATGATGCAGTGGCTTGGCGGTA TGGGAATTATCGTGCTTTTCATAGCCATTCTGCCAAAACTCGGAGTTGCAGGCAGACAGCTCTTCCGGGCTGAAGCCCCT GGCCCAACAGAAGATAAGCTGAAACCAAGAATCAGGGAAACAGCAAAGATCCTGTGGATGGTTTACTTCGTAATCTCATT CGCCCAGGTAGTTACCCTTCTGCTCGCAGGTCTTTCGCTGTACGATGCGGTAAACCATACATTTACCACGATGGCCTGCG GAGGTTTCTCCAATTACGGGTTGAGTATTGGTGCTTTTAACAGTCCTCTTGTTGAGTATATAATAACTTTTTTCACTTTC GTTGCCGGTGCAAACTTTGCACTCCATTACAGGGCGATTTATGTTGACAGGGACTTCCTGCTTAAAGACGATGAGTTCCG TTTCTATACAGCTCTGGTCCTGTCAGCAAGCGGGCTCCTTACTCTTCTGCTATGGAGGGACCTTAATACTGGCTTTTTTG ATTCATTCCGGCTTGCAATCTTTCATGTAGTTACGATAATGACAAGTACCGGGTTTGCAATAGCTGATTTTAATCTCTGG TCAGAATCTTCAAAAATGGTGATTCTTTTAGTTATGTTTATTGGAGGCTGTGCAGGTTCTACAGGTGGAGGCATCAAGGT TGTACGCATTCTTATCTTACTCAGACACAGCCGAACGGAATTGTTCAAGGCTCTTCACCCCAGAGCCATAAAAAGCGTTA AATTCAACAATAAAGCCGTGCCTGATGAGATTATCAGCTCTATAATCTCATTTGTGGTGATTTACCTCCTTATTTTTATC TCAAGCGCCCTTATCCTCTCTGTCCTGGGAATGGACATCATAACTTCAATTACAGCTTCCATTGCTACCCTGGGCAACAT AGGTCCGGGCCTGGGTGTGGTAGGTCCTATGGGTTCTTTTGACCCCATTCCTCCCCTGGGAAAATTAATCCTGATCGCCA ATATGTGGATTGGGAGGCTTGAAATCTACACGGTAATCGTGCTCTTTACTCCTGAGTTCTGGAATAAATAA
Upstream 100 bases:
>100_bases ATCTGTCCCTCATTTTTGAGAAGCTGTTTAAGCAAGAAATAAATATGAATAGTCATGAGTAGATTGAAAGAGTCATCACC TGTAAAAATAGAGGATCGGC
Downstream 100 bases:
>100_bases TTCCATGAAAAAAACCAAGATGCCTGGAAAAAGTAAAATTTAGAAAAACAGGATTTGCAGACAGAACCCCTGCAGGAAAT CTAAAGTAGACCAGAAAAAA
Product: Trk system potassium uptake protein
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MNIKIVFYVLGGLLRLLGIIMVVPLGVAYYYGEDLTPFLVSIAITVITGLILLSYKTDEEWMRKEGFAIVGLGWLIAAVF GAIPFVLDGISPLNALFESMSAFTTTGSTILTDIESHPKGILFWRGMMQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAP GPTEDKLKPRIRETAKILWMVYFVISFAQVVTLLLAGLSLYDAVNHTFTTMACGGFSNYGLSIGAFNSPLVEYIITFFTF VAGANFALHYRAIYVDRDFLLKDDEFRFYTALVLSASGLLTLLLWRDLNTGFFDSFRLAIFHVVTIMTSTGFAIADFNLW SESSKMVILLVMFIGGCAGSTGGGIKVVRILILLRHSRTELFKALHPRAIKSVKFNNKAVPDEIISSIISFVVIYLLIFI SSALILSVLGMDIITSITASIATLGNIGPGLGVVGPMGSFDPIPPLGKLILIANMWIGRLEIYTVIVLFTPEFWNK
Sequences:
>Translated_476_residues MNIKIVFYVLGGLLRLLGIIMVVPLGVAYYYGEDLTPFLVSIAITVITGLILLSYKTDEEWMRKEGFAIVGLGWLIAAVF GAIPFVLDGISPLNALFESMSAFTTTGSTILTDIESHPKGILFWRGMMQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAP GPTEDKLKPRIRETAKILWMVYFVISFAQVVTLLLAGLSLYDAVNHTFTTMACGGFSNYGLSIGAFNSPLVEYIITFFTF VAGANFALHYRAIYVDRDFLLKDDEFRFYTALVLSASGLLTLLLWRDLNTGFFDSFRLAIFHVVTIMTSTGFAIADFNLW SESSKMVILLVMFIGGCAGSTGGGIKVVRILILLRHSRTELFKALHPRAIKSVKFNNKAVPDEIISSIISFVVIYLLIFI SSALILSVLGMDIITSITASIATLGNIGPGLGVVGPMGSFDPIPPLGKLILIANMWIGRLEIYTVIVLFTPEFWNK >Mature_476_residues MNIKIVFYVLGGLLRLLGIIMVVPLGVAYYYGEDLTPFLVSIAITVITGLILLSYKTDEEWMRKEGFAIVGLGWLIAAVF GAIPFVLDGISPLNALFESMSAFTTTGSTILTDIESHPKGILFWRGMMQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAP GPTEDKLKPRIRETAKILWMVYFVISFAQVVTLLLAGLSLYDAVNHTFTTMACGGFSNYGLSIGAFNSPLVEYIITFFTF VAGANFALHYRAIYVDRDFLLKDDEFRFYTALVLSASGLLTLLLWRDLNTGFFDSFRLAIFHVVTIMTSTGFAIADFNLW SESSKMVILLVMFIGGCAGSTGGGIKVVRILILLRHSRTELFKALHPRAIKSVKFNNKAVPDEIISSIISFVVIYLLIFI SSALILSVLGMDIITSITASIATLGNIGPGLGVVGPMGSFDPIPPLGKLILIANMWIGRLEIYTVIVLFTPEFWNK
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA and requires trkE for transport activity [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI48994987, Length=488, Percent_Identity=40.9836065573771, Blast_Score=309, Evalue=3e-85, Organism=Escherichia coli, GI1787626, Length=489, Percent_Identity=34.7648261758691, Blast_Score=284, Evalue=7e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 52284; Mature: 52284
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKIVFYVLGGLLRLLGIIMVVPLGVAYYYGEDLTPFLVSIAITVITGLILLSYKTDEE CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH WMRKEGFAIVGLGWLIAAVFGAIPFVLDGISPLNALFESMSAFTTTGSTILTDIESHPKG HHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCH ILFWRGMMQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAPGPTEDKLKPRIRETAKILWM HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHH VYFVISFAQVVTLLLAGLSLYDAVNHTFTTMACGGFSNYGLSIGAFNSPLVEYIITFFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHH VAGANFALHYRAIYVDRDFLLKDDEFRFYTALVLSASGLLTLLLWRDLNTGFFDSFRLAI HHCCCEEEEEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FHVVTIMTSTGFAIADFNLWSESSKMVILLVMFIGGCAGSTGGGIKVVRILILLRHSRTE HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LFKALHPRAIKSVKFNNKAVPDEIISSIISFVVIYLLIFISSALILSVLGMDIITSITAS HHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLGNIGPGLGVVGPMGSFDPIPPLGKLILIANMWIGRLEIYTVIVLFTPEFWNK HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCHHCCC >Mature Secondary Structure MNIKIVFYVLGGLLRLLGIIMVVPLGVAYYYGEDLTPFLVSIAITVITGLILLSYKTDEE CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH WMRKEGFAIVGLGWLIAAVFGAIPFVLDGISPLNALFESMSAFTTTGSTILTDIESHPKG HHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCH ILFWRGMMQWLGGMGIIVLFIAILPKLGVAGRQLFRAEAPGPTEDKLKPRIRETAKILWM HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHH VYFVISFAQVVTLLLAGLSLYDAVNHTFTTMACGGFSNYGLSIGAFNSPLVEYIITFFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHH VAGANFALHYRAIYVDRDFLLKDDEFRFYTALVLSASGLLTLLLWRDLNTGFFDSFRLAI HHCCCEEEEEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FHVVTIMTSTGFAIADFNLWSESSKMVILLVMFIGGCAGSTGGGIKVVRILILLRHSRTE HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LFKALHPRAIKSVKFNNKAVPDEIISSIISFVVIYLLIFISSALILSVLGMDIITSITAS HHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLGNIGPGLGVVGPMGSFDPIPPLGKLILIANMWIGRLEIYTVIVLFTPEFWNK HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]