| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is fpoO
Identifier: 21228581
GI number: 21228581
Start: 2958984
End: 2959379
Strand: Reverse
Name: fpoO
Synonym: MM_2479
Alternate gene names: NA
Gene position: 2959379-2958984 (Counterclockwise)
Preceding gene: 21228582
Following gene: 21228580
Centisome position: 72.24
GC content: 50.0
Gene sequence:
>396_bases ATGACAGATTGCGACCTGTGTGGAAAAGGAATCCCGACCGTTATCCCGGTCAGGACTTACCCTCCTCTCCTGAGATTCGC CTACCCCGAGGGGGTCTGGAAAGGGCTCTGTGAGACCTGTCTCGATTCCGCCCAGAAAACATACCTGGAAGTGAACAGGA ACCACACTTCATGCAGAAGAGGCAAATGCTCTCTCTGCGGAAGCAAAACCGGTGTTTTCTCAGTGGAACTGCAGATCCCC GATTTCTCAAAAGGAATTGTTAGAAAAGATGTGGATGTCTGCTACAGGTGCCTGAAATTAGTCGATGAGGCTTATATCAG GTACAAAAGAGAGCAGATCGAACAGGACCACGAACAGGGAAGGATTCATGGGCACGAACACGTACACCCGCATTAA
Upstream 100 bases:
>100_bases GTTGCAGGCGTGCTGGTAATGGGTCTCTGGCCTGAACCCTTCGTGGAACTGGCTATGAAAGCAGCAATGGTACTTGTGCC ATTCTAAGGAGGTATTAGAA
Downstream 100 bases:
>100_bases ATATTGAGTAAAGCTACTTTTTAAAGTGGCTTTATTTTTTATTCTTTATTTTGGTCTTTCGGTAGATTGCTTTTTTTCAT TATAATAAACGTAAATTTTA
Product: F420H2 dehydrogenase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTDCDLCGKGIPTVIPVRTYPPLLRFAYPEGVWKGLCETCLDSAQKTYLEVNRNHTSCRRGKCSLCGSKTGVFSVELQIP DFSKGIVRKDVDVCYRCLKLVDEAYIRYKREQIEQDHEQGRIHGHEHVHPH
Sequences:
>Translated_131_residues MTDCDLCGKGIPTVIPVRTYPPLLRFAYPEGVWKGLCETCLDSAQKTYLEVNRNHTSCRRGKCSLCGSKTGVFSVELQIP DFSKGIVRKDVDVCYRCLKLVDEAYIRYKREQIEQDHEQGRIHGHEHVHPH >Mature_130_residues TDCDLCGKGIPTVIPVRTYPPLLRFAYPEGVWKGLCETCLDSAQKTYLEVNRNHTSCRRGKCSLCGSKTGVFSVELQIPD FSKGIVRKDVDVCYRCLKLVDEAYIRYKREQIEQDHEQGRIHGHEHVHPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15019; Mature: 14888
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00197 2FE2S_FER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDCDLCGKGIPTVIPVRTYPPLLRFAYPEGVWKGLCETCLDSAQKTYLEVNRNHTSCRR CCCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC GKCSLCGSKTGVFSVELQIPDFSKGIVRKDVDVCYRCLKLVDEAYIRYKREQIEQDHEQG CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RIHGHEHVHPH CCCCCCCCCCC >Mature Secondary Structure TDCDLCGKGIPTVIPVRTYPPLLRFAYPEGVWKGLCETCLDSAQKTYLEVNRNHTSCRR CCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC GKCSLCGSKTGVFSVELQIPDFSKGIVRKDVDVCYRCLKLVDEAYIRYKREQIEQDHEQG CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RIHGHEHVHPH CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA