Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228526

Identifier: 21228526

GI number: 21228526

Start: 2892344

End: 2893501

Strand: Reverse

Name: 21228526

Synonym: MM_2424

Alternate gene names: NA

Gene position: 2893501-2892344 (Counterclockwise)

Preceding gene: 21228527

Following gene: 21228524

Centisome position: 70.64

GC content: 43.61

Gene sequence:

>1158_bases
ATGGTAAACACGTTATCCCATATTGGAATTGGTCTGCTTCTTGCCCACGCCCTCGGTCTTAAGGGGAGGAAAAGGCTTGG
CCTTGTCCTTCTCTCCATAGTCCCTGACATCGATTATTTTAGCTATTCGTTATTTACGCTTATCAGCGGCAGCGTAAGCC
ACGAAGCGAGAAACCAGCTATTTTACCTGCTCGGGCACAGGGAGTTGACACATTCTGTTTTTTTTGCAGTTATTCTTGCA
GTTCTTATCTGGATAAAAACCAGAGACAGAACTTATACATTCGGAGGTTTTCTGGCTGTCTTCCTTCACAGCTTCCTGGA
CTATACAACAAGCGCAAAAATGCGCCCATTTTACCCTTTCAGCTTAAACGAGTCCGCTCTCAGAGCAATCTATCCTTTCG
ACCCCGTGGTAAATGTCATTCCCCTTCTGCCTCTCTTTATTGTAGCTGCGGAATACATTAAGAGCCGTGGCGTAAGAAAA
TATAAAAAGAAGCATGCCTGGAATATCAAAGATTTGTATCCGTGGGATTTGAAAATCAGGGGAAAATGGAGTGTTCGGGA
CAGAGATGTCTGGGACCGGAGATTAAAAAGGCTGAATATTTTCCACAGCTTTGTGAACAGAAACGAAGACAAATTCTATG
CCTCTTTCATCATAGTCCTGCTGATATGGACCACAATGTTTCCGGTGGCAAAAATCTTCCTTATAGACCGCATCTCAAGG
ACCGAAGGTACAGAAATAAGTTACAATGATACCTACCCTATATCTACCGGAAAATTCCTGGCAGCGTATCCCGCCGATGA
TTCCCGCTATAAACTCCTTGAAATAAGCTACTGGGCAGGAGTAGAAAAGAGCTTTTATGTAGACAGGGTTACCGTTGAAG
GAGATGTCCCGGACGCTTCCAGATATGCAGAAAGAGCCGGTAATTTATACAGTAACTCAGTGCCTCAGGCTATCGATTAC
CCTGTATATTCAGTATCCGAAAAGGACGGCGCGGTAACCGTAATTTTGAGCGATGCAAGAAATCCTTATGTTAAAAAGTG
GCCTTATTTCGACACGGTTTACAGGTTTGTGTTTGACAGGGAAAGTAGAGATTACGAGGTGTACGAAAGCCACTACGGTA
GACCGGAAAAAAAGCTTGATAAAAATTATTTTGAGTGA

Upstream 100 bases:

>100_bases
GCTTGCATTAATTTACATTAAAATTTTAATACTGGATTCACCAGAATGACAACTATTAAGCGCGTTATAATAGCACGGAA
TATAAATTCATGGTAGATAT

Downstream 100 bases:

>100_bases
TTTCGGAAGCTCATGGGCATTACAGGGAATTTTTATTAATAATTTACAGAGAATTTTTATTAATAATTTACAGAGAATTT
TTATTAATAATTTACAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MVNTLSHIGIGLLLAHALGLKGRKRLGLVLLSIVPDIDYFSYSLFTLISGSVSHEARNQLFYLLGHRELTHSVFFAVILA
VLIWIKTRDRTYTFGGFLAVFLHSFLDYTTSAKMRPFYPFSLNESALRAIYPFDPVVNVIPLLPLFIVAAEYIKSRGVRK
YKKKHAWNIKDLYPWDLKIRGKWSVRDRDVWDRRLKRLNIFHSFVNRNEDKFYASFIIVLLIWTTMFPVAKIFLIDRISR
TEGTEISYNDTYPISTGKFLAAYPADDSRYKLLEISYWAGVEKSFYVDRVTVEGDVPDASRYAERAGNLYSNSVPQAIDY
PVYSVSEKDGAVTVILSDARNPYVKKWPYFDTVYRFVFDRESRDYEVYESHYGRPEKKLDKNYFE

Sequences:

>Translated_385_residues
MVNTLSHIGIGLLLAHALGLKGRKRLGLVLLSIVPDIDYFSYSLFTLISGSVSHEARNQLFYLLGHRELTHSVFFAVILA
VLIWIKTRDRTYTFGGFLAVFLHSFLDYTTSAKMRPFYPFSLNESALRAIYPFDPVVNVIPLLPLFIVAAEYIKSRGVRK
YKKKHAWNIKDLYPWDLKIRGKWSVRDRDVWDRRLKRLNIFHSFVNRNEDKFYASFIIVLLIWTTMFPVAKIFLIDRISR
TEGTEISYNDTYPISTGKFLAAYPADDSRYKLLEISYWAGVEKSFYVDRVTVEGDVPDASRYAERAGNLYSNSVPQAIDY
PVYSVSEKDGAVTVILSDARNPYVKKWPYFDTVYRFVFDRESRDYEVYESHYGRPEKKLDKNYFE
>Mature_385_residues
MVNTLSHIGIGLLLAHALGLKGRKRLGLVLLSIVPDIDYFSYSLFTLISGSVSHEARNQLFYLLGHRELTHSVFFAVILA
VLIWIKTRDRTYTFGGFLAVFLHSFLDYTTSAKMRPFYPFSLNESALRAIYPFDPVVNVIPLLPLFIVAAEYIKSRGVRK
YKKKHAWNIKDLYPWDLKIRGKWSVRDRDVWDRRLKRLNIFHSFVNRNEDKFYASFIIVLLIWTTMFPVAKIFLIDRISR
TEGTEISYNDTYPISTGKFLAAYPADDSRYKLLEISYWAGVEKSFYVDRVTVEGDVPDASRYAERAGNLYSNSVPQAIDY
PVYSVSEKDGAVTVILSDARNPYVKKWPYFDTVYRFVFDRESRDYEVYESHYGRPEKKLDKNYFE

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44888; Mature: 44888

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNTLSHIGIGLLLAHALGLKGRKRLGLVLLSIVPDIDYFSYSLFTLISGSVSHEARNQL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCE
FYLLGHRELTHSVFFAVILAVLIWIKTRDRTYTFGGFLAVFLHSFLDYTTSAKMRPFYPF
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
SLNESALRAIYPFDPVVNVIPLLPLFIVAAEYIKSRGVRKYKKKHAWNIKDLYPWDLKIR
CCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEE
GKWSVRDRDVWDRRLKRLNIFHSFVNRNEDKFYASFIIVLLIWTTMFPVAKIFLIDRISR
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEGTEISYNDTYPISTGKFLAAYPADDSRYKLLEISYWAGVEKSFYVDRVTVEGDVPDAS
CCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCHH
RYAERAGNLYSNSVPQAIDYPVYSVSEKDGAVTVILSDARNPYVKKWPYFDTVYRFVFDR
HHHHHCCCCCCCCCCCHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCC
ESRDYEVYESHYGRPEKKLDKNYFE
CCCCCHHHHHHCCCCHHHHCCCCCC
>Mature Secondary Structure
MVNTLSHIGIGLLLAHALGLKGRKRLGLVLLSIVPDIDYFSYSLFTLISGSVSHEARNQL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCE
FYLLGHRELTHSVFFAVILAVLIWIKTRDRTYTFGGFLAVFLHSFLDYTTSAKMRPFYPF
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
SLNESALRAIYPFDPVVNVIPLLPLFIVAAEYIKSRGVRKYKKKHAWNIKDLYPWDLKIR
CCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEE
GKWSVRDRDVWDRRLKRLNIFHSFVNRNEDKFYASFIIVLLIWTTMFPVAKIFLIDRISR
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEGTEISYNDTYPISTGKFLAAYPADDSRYKLLEISYWAGVEKSFYVDRVTVEGDVPDAS
CCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCHH
RYAERAGNLYSNSVPQAIDYPVYSVSEKDGAVTVILSDARNPYVKKWPYFDTVYRFVFDR
HHHHHCCCCCCCCCCCHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCC
ESRDYEVYESHYGRPEKKLDKNYFE
CCCCCHHHHHHCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA