Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228524

Identifier: 21228524

GI number: 21228524

Start: 2889708

End: 2890766

Strand: Reverse

Name: 21228524

Synonym: MM_2422

Alternate gene names: NA

Gene position: 2890766-2889708 (Counterclockwise)

Preceding gene: 21228526

Following gene: 21228517

Centisome position: 70.57

GC content: 47.4

Gene sequence:

>1059_bases
ATGGTAAATACACTCTCCCATCTTGGAGTCGGTCTCCTGATCGCTCTTGCTCTCGGATTCAAAGGAAAAAAACGAAATGT
TGTGGCATTCCTGTCAATCCTCCCTGACCTCGATTTTATCCCATACACCCTTTTTTTCCTTCTCAGCAGCAGCGTGAGCC
ACGAGACAAGAACCCATCTCTTTTACTTCCTGGGCCACAGGGAGTTCATGCATTCCATCCTGTTTATCTTTCTTGTCACG
CTTTTCATCTGGCTCAGGACTAAAGACCGCCTGTTCACAGCCGCGGGGTTTGCAGCCATTCTGTCCCACAGCTACCTTGA
TTATGCCACAAGCTGGAAAATGCGCCCCCTTTTCCCGTTCAGCACAGAATCATCTATCATGGGAGCAGTCTATTTTTTCG
ACCCCATTGCAAACCTACTGCCCCTGCTGCCCATTTTTATTGTGCTTGTGGGATATCAGAAAAACCGGGGCAGATGGAAC
GGCAAATTCAACAGGTTCTGTACTTTCGTAACCAATAACCGGCGCAGCCTTTACAGGACGCTTGCAGTTGTGCTTCTGGT
CTGGATTACAGTCCTCCCGGTAGCCAAGTTTTTCCTTGTCAACCAGATTTCCGAAGCCGAAGGAACGAGAATAAGCTACC
AGGGGACCTACCCGGTTTCACCCGGAAAATTCCTGGCTGCATACGAATATAACGACACACATTTCAAGATTATGGAAATC
GGCTACCTTTCAGGCATCGAAAGAAGTGATTTTATCGAAAAAATTAACTCAACCGGCAGCGTCCCCGATGCGTCCACCTA
CGCTGAAAGAGCAGGAAAACTTTACAGCACAGCCGTTCCTCAGGAAATCGATTATCCTGTTTTTTCGGTTTCCGAAAATG
GAGATAACGGCACGGTTACTGTCCTGCTGAGCGATGCAAGGAATTCTTATGTTGAAAACTGGGCTTATTTCAGGACGGTT
TACAGGTTTGTTTTTGATAAGGAAAGCGGGGAATATGAGGCTTATGCGAGTGAACAGACGGGAAGGGAGAGGAGGTTGGA
GAGGAATTATTTTGGGTGA

Upstream 100 bases:

>100_bases
CAGGAAACGAATTTGCCCGGGAATATAAAAAGTAAAAATAATAGGAAAAAGAAAGTAAAGAGTGAGAATAAAAGCAAAAG
AAAACTCGGGATAAAAGTAA

Downstream 100 bases:

>100_bases
GATTAAAAAAATAACTTATAGAATATTCCGTTGCTGCGTATTTGTTTAAATGTATTTTTGGTTTTGAGTAATTTTGTCGA
ACTTTATAATTCTGTAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHLFYFLGHREFMHSILFIFLVT
LFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPFSTESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWN
GKFNRFCTFVTNNRRSLYRTLAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI
GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVTVLLSDARNSYVENWAYFRTV
YRFVFDKESGEYEAYASEQTGRERRLERNYFG

Sequences:

>Translated_352_residues
MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHLFYFLGHREFMHSILFIFLVT
LFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPFSTESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWN
GKFNRFCTFVTNNRRSLYRTLAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI
GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVTVLLSDARNSYVENWAYFRTV
YRFVFDKESGEYEAYASEQTGRERRLERNYFG
>Mature_352_residues
MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHLFYFLGHREFMHSILFIFLVT
LFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPFSTESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWN
GKFNRFCTFVTNNRRSLYRTLAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI
GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVTVLLSDARNSYVENWAYFRTV
YRFVFDKESGEYEAYASEQTGRERRLERNYFG

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40318; Mature: 40318

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHL
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH
FYFLGHREFMHSILFIFLVTLFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
STESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWNGKFNRFCTFVTNNRRSLYRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
LAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEE
GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVT
HHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCEEE
VLLSDARNSYVENWAYFRTVYRFVFDKESGEYEAYASEQTGRERRLERNYFG
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHCCHHHHHHHCCCC
>Mature Secondary Structure
MVNTLSHLGVGLLIALALGFKGKKRNVVAFLSILPDLDFIPYTLFFLLSSSVSHETRTHL
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH
FYFLGHREFMHSILFIFLVTLFIWLRTKDRLFTAAGFAAILSHSYLDYATSWKMRPLFPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
STESSIMGAVYFFDPIANLLPLLPIFIVLVGYQKNRGRWNGKFNRFCTFVTNNRRSLYRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHH
LAVVLLVWITVLPVAKFFLVNQISEAEGTRISYQGTYPVSPGKFLAAYEYNDTHFKIMEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEE
GYLSGIERSDFIEKINSTGSVPDASTYAERAGKLYSTAVPQEIDYPVFSVSENGDNGTVT
HHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCEEE
VLLSDARNSYVENWAYFRTVYRFVFDKESGEYEAYASEQTGRERRLERNYFG
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA