| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228510
Identifier: 21228510
GI number: 21228510
Start: 2869821
End: 2870030
Strand: Reverse
Name: 21228510
Synonym: MM_2408
Alternate gene names: NA
Gene position: 2870030-2869821 (Counterclockwise)
Preceding gene: 21228517
Following gene: 21228507
Centisome position: 70.06
GC content: 43.81
Gene sequence:
>210_bases ATGTCCTCAGAGTCGCAAAGGGATGAGGATATCTTCGAATCCCAGTTTATAGATAAGTACCTCAGCGAATATGCGAGCAT TTCTTCAATCGTACGCGAGGCGCTTCTCTTTGAGCTTCTTGCGACTGTGGGAGGAGTCGTTGCAGGAATAATTCTTTCAG GAATTAGGCAGACTAAGCTTTCAAATAAAACGAAGTCTCGAAGTCTGTAA
Upstream 100 bases:
>100_bases CTATGCAAGAAAACCTTTATAATAACAAAGAAATTTTCCACATACTCTTTTTTTGAATGTTACCCATTATTTTAATAATA TCAGCGTATAATACAACCGC
Downstream 100 bases:
>100_bases TAGAGTTATTTTTGCTTGATTCGTTTTCATCTGAGCTACTACCATAACCAGATTCAGAATTTTTTTTGAATTATTGAGTC TGACTGCGTTTTTTTAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSSESQRDEDIFESQFIDKYLSEYASISSIVREALLFELLATVGGVVAGIILSGIRQTKLSNKTKSRSL
Sequences:
>Translated_69_residues MSSESQRDEDIFESQFIDKYLSEYASISSIVREALLFELLATVGGVVAGIILSGIRQTKLSNKTKSRSL >Mature_68_residues SSESQRDEDIFESQFIDKYLSEYASISSIVREALLFELLATVGGVVAGIILSGIRQTKLSNKTKSRSL
Specific function: Unknown
COG id: COG1824
COG function: function code P; Permease, similar to cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7628; Mature: 7497
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSESQRDEDIFESQFIDKYLSEYASISSIVREALLFELLATVGGVVAGIILSGIRQTKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKTKSRSL HHHHHCCCC >Mature Secondary Structure SSESQRDEDIFESQFIDKYLSEYASISSIVREALLFELLATVGGVVAGIILSGIRQTKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNKTKSRSL HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA