| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228507
Identifier: 21228507
GI number: 21228507
Start: 2866175
End: 2866801
Strand: Reverse
Name: 21228507
Synonym: MM_2405
Alternate gene names: NA
Gene position: 2866801-2866175 (Counterclockwise)
Preceding gene: 21228510
Following gene: 21228506
Centisome position: 69.98
GC content: 46.89
Gene sequence:
>627_bases ATGTCCTCAGAGTCGCAAAGGGATGAGGATATCTTCGAATCCCAGTATATAGACATGTACCTCAGCGAGTACGCGAGCAT TTCTTCAATCGTACGCGAGGCGCTGCCTTTTGAACTTCTTGCGACTGTAGGAGGAGTTATTGCAGGGATTATTCTTTCAA AGATGACAAACGAACTTGAGATGATTCCAGGACTACTTGTAATTTATCCGGGTGTGCTTGGGCTACGCGGAAATATTTCC TCTACTCTGGGCTCAAGGCTCGGCAGCGCGATCCACATGGGTCTTATCACGGATATAGACAGGAATAACCCTGAACTTGT AAACAACATTTCAGGATCTCTTCTCCTTGGCTTTATTATGGCTATCCTGCTCGGAGTTTTAGGGCATTTTGTCACCCTTG CCCTGGGATTTGAAAGTGCCGGCATCTTTAAGCTTGTACTCATCTGTGCAATTTCGGCACTTACTTCCGGAGTGATCCTC TCTTTTGTTGCCGTCCTGCTTGCCATAGGCACTTTCAGGTTCGGTTTTGACCCGGATAATGTTGTAACCCCTTCAATTGC AACCATCGGGGATATTGTCTCCATGCTCATGCTCTTCCTGTCTGCAAAACTGGTGGTGATGCTCTGA
Upstream 100 bases:
>100_bases CTATGCAAGAAAACCTTTATAATAACAAAGAAATTTTCCACATACTCTTTTTTTGAATGTTACCCATTATTTTAATAATA TCAGCGTATAATACAACCGC
Downstream 100 bases:
>100_bases AAAAATCCAGGAAACAGACCAGCTACTACACCGTAGAAGGCATCATCCGGCGTGGGCTTCCCGTGCTTACCATAACATGC GTAATGGGCATTATTGTAGG
Product: cation transporter
Products: NA
Alternate protein names: Divalent Cation Transporter; Cation Transporter; Divalent Cation Transporter MgtE-Like Protein; Transport System; Divalent Cation Transporter MgtE Family; Transporter Protein; Divalent Cation Transporter Domain-Containing Protein; Mg2+ Transporter; MgtE-Like Divalent Cation Transporter; Divalent Cation Transporter Subunit I MgtE Family Protein; MgtE Divalent Cation Transporter
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSSESQRDEDIFESQYIDMYLSEYASISSIVREALPFELLATVGGVIAGIILSKMTNELEMIPGLLVIYPGVLGLRGNIS STLGSRLGSAIHMGLITDIDRNNPELVNNISGSLLLGFIMAILLGVLGHFVTLALGFESAGIFKLVLICAISALTSGVIL SFVAVLLAIGTFRFGFDPDNVVTPSIATIGDIVSMLMLFLSAKLVVML
Sequences:
>Translated_208_residues MSSESQRDEDIFESQYIDMYLSEYASISSIVREALPFELLATVGGVIAGIILSKMTNELEMIPGLLVIYPGVLGLRGNIS STLGSRLGSAIHMGLITDIDRNNPELVNNISGSLLLGFIMAILLGVLGHFVTLALGFESAGIFKLVLICAISALTSGVIL SFVAVLLAIGTFRFGFDPDNVVTPSIATIGDIVSMLMLFLSAKLVVML >Mature_207_residues SSESQRDEDIFESQYIDMYLSEYASISSIVREALPFELLATVGGVIAGIILSKMTNELEMIPGLLVIYPGVLGLRGNISS TLGSRLGSAIHMGLITDIDRNNPELVNNISGSLLLGFIMAILLGVLGHFVTLALGFESAGIFKLVLICAISALTSGVILS FVAVLLAIGTFRFGFDPDNVVTPSIATIGDIVSMLMLFLSAKLVVML
Specific function: Unknown
COG id: COG1824
COG function: function code P; Permease, similar to cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51702206, Length=172, Percent_Identity=31.3953488372093, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI207444687, Length=178, Percent_Identity=32.0224719101124, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI161077637, Length=183, Percent_Identity=28.4153005464481, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI161077641, Length=184, Percent_Identity=28.2608695652174, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI161077639, Length=184, Percent_Identity=28.2608695652174, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI161077634, Length=184, Percent_Identity=28.2608695652174, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI28571138, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22117; Mature: 21985
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSESQRDEDIFESQYIDMYLSEYASISSIVREALPFELLATVGGVIAGIILSKMTNELE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIPGLLVIYPGVLGLRGNISSTLGSRLGSAIHMGLITDIDRNNPELVNNISGSLLLGFIM HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH AILLGVLGHFVTLALGFESAGIFKLVLICAISALTSGVILSFVAVLLAIGTFRFGFDPDN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VVTPSIATIGDIVSMLMLFLSAKLVVML CCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSESQRDEDIFESQYIDMYLSEYASISSIVREALPFELLATVGGVIAGIILSKMTNELE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIPGLLVIYPGVLGLRGNISSTLGSRLGSAIHMGLITDIDRNNPELVNNISGSLLLGFIM HHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH AILLGVLGHFVTLALGFESAGIFKLVLICAISALTSGVILSFVAVLLAIGTFRFGFDPDN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VVTPSIATIGDIVSMLMLFLSAKLVVML CCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA