Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228495

Identifier: 21228495

GI number: 21228495

Start: 2855186

End: 2855641

Strand: Reverse

Name: 21228495

Synonym: MM_2393

Alternate gene names: NA

Gene position: 2855641-2855186 (Counterclockwise)

Preceding gene: 21228496

Following gene: 21228494

Centisome position: 69.71

GC content: 45.61

Gene sequence:

>456_bases
ATGTTCAGTATAAACGTAAGTCCGCGCTTTGGAGATATTGACGGCCTCGGGCACGTAAATAACACAGTCCTTCCGGTCTG
GTTCGAAATAGGAAGAAACCCAATTTTCAGGCTTTTCTCCCCGGACCTTGACCTCAGCCCTGATGTGTGGCATCTGATAC
TTGTCAGAATTGAGTTTGATTTTCTGAGCCAGATGTATTTCAGATCCGATGTTGAAATCAGGACTTACATTACAAAAATC
GGGAACAGTTCCTTTACTGTCGGTCACGAGGCATGGCAGGAGGGGGAACTCAAGGTAAGAGGTCAGGCGGTACTTGTTTA
CTATGACTTCAAACTCCAGAAATCAATCCCGCTTCCGGAATCAATCCGCGAAATTTTGAAAGCACATATGTTTCCTTCAA
TGGACTCCTCCTCATCTGACGCGGAAACTGGTACGGATTCTCCCTGCTCAATATAA

Upstream 100 bases:

>100_bases
TGTGAGAGAACAGGCTATGACTTAATTGATGACTGAAAAAGCAAATTTAGATTAAAAACTGGATAATCAAGTAAAGACAT
TAAGAGCTAGGGAATCCAAA

Downstream 100 bases:

>100_bases
ACGTACTTCAGAAACCTTTGACCAGAATGGACGTTAAAAATCCGGACATGGCCCGGAGGTGTCTGAAAGTATAGTCCAGA
AGGAGAGGCTGAAATTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Thioesterase; Thioesterase Superfamily; Thioesterase FcbC; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFDFLSQMYFRSDVEIRTYITKI
GNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPESIREILKAHMFPSMDSSSSDAETGTDSPCSI

Sequences:

>Translated_151_residues
MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFDFLSQMYFRSDVEIRTYITKI
GNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPESIREILKAHMFPSMDSSSSDAETGTDSPCSI
>Mature_151_residues
MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFDFLSQMYFRSDVEIRTYITKI
GNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPESIREILKAHMFPSMDSSSSDAETGTDSPCSI

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17218; Mature: 17218

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFD
CEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECHH
FLSQMYFRSDVEIRTYITKIGNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPE
HHHHHHHCCCCHHEEEEHHHCCCCEEECHHHCCCCCEEECCCEEEEEEEEEEECCCCCCH
SIREILKAHMFPSMDSSSSDAETGTDSPCSI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSINVSPRFGDIDGLGHVNNTVLPVWFEIGRNPIFRLFSPDLDLSPDVWHLILVRIEFD
CEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECHH
FLSQMYFRSDVEIRTYITKIGNSSFTVGHEAWQEGELKVRGQAVLVYYDFKLQKSIPLPE
HHHHHHHCCCCHHEEEEHHHCCCCEEECHHHCCCCCEEECCCEEEEEEEEEEECCCCCCH
SIREILKAHMFPSMDSSSSDAETGTDSPCSI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA