Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228488

Identifier: 21228488

GI number: 21228488

Start: 2844698

End: 2845222

Strand: Direct

Name: 21228488

Synonym: MM_2386

Alternate gene names: NA

Gene position: 2844698-2845222 (Clockwise)

Preceding gene: 21228486

Following gene: 21228489

Centisome position: 69.44

GC content: 44.0

Gene sequence:

>525_bases
ATGAAATCTCAGGATATTGCTGTTGTTGGAATTTTACTCGCAGTCGGTGCGATAGTTCGATATTTATCCCTTGTAATCCC
TGGACCAATTGTCTCAAATCTCGTAATAGCATTTTACTGTCTTGCCATTATACTTGTCATACCTGCGTTCACTGAAGTAA
TAGGTATAGGAATTGTAGCAGGAATAGTCTGTGCCCTCCTGAGCCATTCTATCTTTCCGCCTGCAAACCTTATCAGTGAA
CCGATTGGTGCAGTAACCTGCCTGGCAATATACAAAACACTTATGGGAAGGCTCTCAGTCGCCCCTGCAATTTCAACCCT
TCTCGGGACCCTTGCCAGCGGGATAAGTTTCGTAGCTATTGCAATGTTCATGGTCGCTCCTGCAATTCTGACCAAATACG
ACACTATGGGGGCTTTTGTAATAGCTATTGTTCCTATTGTAGGCTTGACCGCAATTGCGAACGCAATTATTGTCCAGATT
CTCTATGTTCCTGCTTCAAAGGTACTTTCCAGGGGGAAAGCATAA

Upstream 100 bases:

>100_bases
CCTTAAAGGATTTACGATATTCAACTGATCTTTCAACTAATATGTGGTGTTTATGGATTCAGGAAAGTTCTCCTGATAAT
AAAATAGGTAGATGGTTTTT

Downstream 100 bases:

>100_bases
AACATGATCGAGCTCAGGAACTTGTCTTATACATACGGGACAGCGGAAGAACCCTCCCTGAAAAATATAAATCTGAAAGT
TAAAAAAGGAGAACTGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKSQDIAVVGILLAVGAIVRYLSLVIPGPIVSNLVIAFYCLAIILVIPAFTEVIGIGIVAGIVCALLSHSIFPPANLISE
PIGAVTCLAIYKTLMGRLSVAPAISTLLGTLASGISFVAIAMFMVAPAILTKYDTMGAFVIAIVPIVGLTAIANAIIVQI
LYVPASKVLSRGKA

Sequences:

>Translated_174_residues
MKSQDIAVVGILLAVGAIVRYLSLVIPGPIVSNLVIAFYCLAIILVIPAFTEVIGIGIVAGIVCALLSHSIFPPANLISE
PIGAVTCLAIYKTLMGRLSVAPAISTLLGTLASGISFVAIAMFMVAPAILTKYDTMGAFVIAIVPIVGLTAIANAIIVQI
LYVPASKVLSRGKA
>Mature_174_residues
MKSQDIAVVGILLAVGAIVRYLSLVIPGPIVSNLVIAFYCLAIILVIPAFTEVIGIGIVAGIVCALLSHSIFPPANLISE
PIGAVTCLAIYKTLMGRLSVAPAISTLLGTLASGISFVAIAMFMVAPAILTKYDTMGAFVIAIVPIVGLTAIANAIIVQI
LYVPASKVLSRGKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17873; Mature: 17873

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQDIAVVGILLAVGAIVRYLSLVIPGPIVSNLVIAFYCLAIILVIPAFTEVIGIGIVA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVCALLSHSIFPPANLISEPIGAVTCLAIYKTLMGRLSVAPAISTLLGTLASGISFVAI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMFMVAPAILTKYDTMGAFVIAIVPIVGLTAIANAIIVQILYVPASKVLSRGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSQDIAVVGILLAVGAIVRYLSLVIPGPIVSNLVIAFYCLAIILVIPAFTEVIGIGIVA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVCALLSHSIFPPANLISEPIGAVTCLAIYKTLMGRLSVAPAISTLLGTLASGISFVAI
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMFMVAPAILTKYDTMGAFVIAIVPIVGLTAIANAIIVQILYVPASKVLSRGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA