Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228486

Identifier: 21228486

GI number: 21228486

Start: 2841817

End: 2842242

Strand: Direct

Name: 21228486

Synonym: MM_2384

Alternate gene names: NA

Gene position: 2841817-2842242 (Clockwise)

Preceding gene: 21228485

Following gene: 21228488

Centisome position: 69.37

GC content: 45.31

Gene sequence:

>426_bases
GTGGAAGCAGGCATGGATCTTGAAGAAGAAGCATATAACATAATACGAAGACATAAAGACGGCGTTTTCCAGAACGTTAT
CTGGAAAGAGCTGGATATCGACAGCAGGAAATGCTCCAGAATCATAAAAAAGCTTCTGGACAAAGACCTTATTATCCGTG
AAGTGGGAGTCTCAAACGGAGCAAGGACATACCTCCTTAAAGCAAAAGAGGAGGTTAAGGAAAAATACGATCTTCTGCTC
TCCGGGGATATGTTTTCAGCCTGCACAGGCTGTACCGGGGACTGCGAGCCCGAGTACTGCGGAAGACTCAGTGAATGGAT
CGGAAACCTTATGGTGGAAGAAGCTGAGGAAGCCGGAGAAGTCGAAGAAGCCGAAGATATGGATGTAGAAGCTGAAGATG
AGGACAAATTTAAAGAAGAGATCTAA

Upstream 100 bases:

>100_bases
AAGTCCGCTCCCTTGGTTCTGTAGTGCTTCGGGGCAATAATATCATACTGATCACTCCTGTCGAAGACTGAAACGTCTGA
AGAAGGAACCTCATTAGTGT

Downstream 100 bases:

>100_bases
ACAAAATCTGGCATAAGCAAAACTGATAATGTGTGAACTTATAATTTCTAAGAGGCCTGAAAGGTCTGAAAAAATCTGGA
CAGATCTGGACAGATCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MEAGMDLEEEAYNIIRRHKDGVFQNVIWKELDIDSRKCSRIIKKLLDKDLIIREVGVSNGARTYLLKAKEEVKEKYDLLL
SGDMFSACTGCTGDCEPEYCGRLSEWIGNLMVEEAEEAGEVEEAEDMDVEAEDEDKFKEEI

Sequences:

>Translated_141_residues
MEAGMDLEEEAYNIIRRHKDGVFQNVIWKELDIDSRKCSRIIKKLLDKDLIIREVGVSNGARTYLLKAKEEVKEKYDLLL
SGDMFSACTGCTGDCEPEYCGRLSEWIGNLMVEEAEEAGEVEEAEDMDVEAEDEDKFKEEI
>Mature_141_residues
MEAGMDLEEEAYNIIRRHKDGVFQNVIWKELDIDSRKCSRIIKKLLDKDLIIREVGVSNGARTYLLKAKEEVKEKYDLLL
SGDMFSACTGCTGDCEPEYCGRLSEWIGNLMVEEAEEAGEVEEAEDMDVEAEDEDKFKEEI

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16149; Mature: 16149

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAGMDLEEEAYNIIRRHKDGVFQNVIWKELDIDSRKCSRIIKKLLDKDLIIREVGVSNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
ARTYLLKAKEEVKEKYDLLLSGDMFSACTGCTGDCEPEYCGRLSEWIGNLMVEEAEEAGE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VEEAEDMDVEAEDEDKFKEEI
CCCHHCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MEAGMDLEEEAYNIIRRHKDGVFQNVIWKELDIDSRKCSRIIKKLLDKDLIIREVGVSNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
ARTYLLKAKEEVKEKYDLLLSGDMFSACTGCTGDCEPEYCGRLSEWIGNLMVEEAEEAGE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VEEAEDMDVEAEDEDKFKEEI
CCCHHCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA