Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228476

Identifier: 21228476

GI number: 21228476

Start: 2831044

End: 2831886

Strand: Reverse

Name: 21228476

Synonym: MM_2374

Alternate gene names: NA

Gene position: 2831886-2831044 (Counterclockwise)

Preceding gene: 21228478

Following gene: 21228475

Centisome position: 69.13

GC content: 42.82

Gene sequence:

>843_bases
ATGTACCTGCAGGACAGGAGTCCATACATGGAAAATTCAGGTTCAAGCAATGACAGGAATTCAGGAAAAACAGAATACCA
GCTTACTCTTATTGGCGCACTTAAAAAAGAAATTGAAATAGCTCGCAGGCTTGACCCTGAAAAACTCGCAGCCGAAATTA
AAAAAACTGGTTTTTCCTGCCAGAACTGTGGAAAGTGCTGCAAAAGAGCTTTTGGGGATAACAGGGTAGTGTTAACACCT
CAGGAAATCGAAAAAATCCAGAAGTATACGGATCTTTCAAAACTTGAGGTTGCAGGTCCCCTTATCCCTGACATCAGTTG
TCCTGAAGAAGCCGGAGAAGGAGAAGAAGACAGGGTTGCAGAAAACTCTTCCATAATGCCGGAAATAGATGAAAAAAAGA
CTTCAGAGCCTTTCAGGACACCTGAGCTTCTGAAAGAAGACATCGATCCTGATGGAAATATCCATGCTTATGGCTGGATG
CTCAGGCGGAAAAGGAATGGCGACTGTGTTTTTCTTGAAAAGGATACAAACCGGTGCAGGATATACCCTGTGCGTCCAAT
GCTCTGCAGCACCTATCCTTTTTATATTGAGGGACTTAAACTTTATACCTGCGAGTGTGAAGGGCTCGGAGTCCATATTT
CTGCGGAAGAGAGCAGAAAACTCGCAGGCTCCCTGCTTTCCAGATATGTCTCGGAACTCGAAGATACACTTGCCATGTAT
GAAAAATACGAGGATTTCGAAAGGACAGAAAAAGGCCACGAAATTGCAAAAAATAACCTGGAAAAAGGGACCTGCATATA
TATCGTCCATGACAGCAGAGGAATTACAAAAATTATTGATTAA

Upstream 100 bases:

>100_bases
GAACAATCTCAGGTCGAAATGAAACTCAGGAAATGATTTTCACCCTGTTTTTTAAATTTTCCGGGCCTTACTGAATTTGA
CTGTTATCTGCGTTAATTTG

Downstream 100 bases:

>100_bases
GCCTCAGATTTTTTGAGTTTCCGGCTGATTCGTCCAGTTGCAAATTTTTAATTTAATGGTACTTTTTGAAAAAATTATAT
TATATCATCTATGAACTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MYLQDRSPYMENSGSSNDRNSGKTEYQLTLIGALKKEIEIARRLDPEKLAAEIKKTGFSCQNCGKCCKRAFGDNRVVLTP
QEIEKIQKYTDLSKLEVAGPLIPDISCPEEAGEGEEDRVAENSSIMPEIDEKKTSEPFRTPELLKEDIDPDGNIHAYGWM
LRRKRNGDCVFLEKDTNRCRIYPVRPMLCSTYPFYIEGLKLYTCECEGLGVHISAEESRKLAGSLLSRYVSELEDTLAMY
EKYEDFERTEKGHEIAKNNLEKGTCIYIVHDSRGITKIID

Sequences:

>Translated_280_residues
MYLQDRSPYMENSGSSNDRNSGKTEYQLTLIGALKKEIEIARRLDPEKLAAEIKKTGFSCQNCGKCCKRAFGDNRVVLTP
QEIEKIQKYTDLSKLEVAGPLIPDISCPEEAGEGEEDRVAENSSIMPEIDEKKTSEPFRTPELLKEDIDPDGNIHAYGWM
LRRKRNGDCVFLEKDTNRCRIYPVRPMLCSTYPFYIEGLKLYTCECEGLGVHISAEESRKLAGSLLSRYVSELEDTLAMY
EKYEDFERTEKGHEIAKNNLEKGTCIYIVHDSRGITKIID
>Mature_280_residues
MYLQDRSPYMENSGSSNDRNSGKTEYQLTLIGALKKEIEIARRLDPEKLAAEIKKTGFSCQNCGKCCKRAFGDNRVVLTP
QEIEKIQKYTDLSKLEVAGPLIPDISCPEEAGEGEEDRVAENSSIMPEIDEKKTSEPFRTPELLKEDIDPDGNIHAYGWM
LRRKRNGDCVFLEKDTNRCRIYPVRPMLCSTYPFYIEGLKLYTCECEGLGVHISAEESRKLAGSLLSRYVSELEDTLAMY
EKYEDFERTEKGHEIAKNNLEKGTCIYIVHDSRGITKIID

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31919; Mature: 31919

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLQDRSPYMENSGSSNDRNSGKTEYQLTLIGALKKEIEIARRLDPEKLAAEIKKTGFSC
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH
QNCGKCCKRAFGDNRVVLTPQEIEKIQKYTDLSKLEVAGPLIPDISCPEEAGEGEEDRVA
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHCCCCCHHHHC
ENSSIMPEIDEKKTSEPFRTPELLKEDIDPDGNIHAYGWMLRRKRNGDCVFLEKDTNRCR
CCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCCEE
IYPVRPMLCSTYPFYIEGLKLYTCECEGLGVHISAEESRKLAGSLLSRYVSELEDTLAMY
EEECCHHHHCCCCCEEECEEEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
EKYEDFERTEKGHEIAKNNLEKGTCIYIVHDSRGITKIID
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCC
>Mature Secondary Structure
MYLQDRSPYMENSGSSNDRNSGKTEYQLTLIGALKKEIEIARRLDPEKLAAEIKKTGFSC
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH
QNCGKCCKRAFGDNRVVLTPQEIEKIQKYTDLSKLEVAGPLIPDISCPEEAGEGEEDRVA
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHCCCCCHHHHC
ENSSIMPEIDEKKTSEPFRTPELLKEDIDPDGNIHAYGWMLRRKRNGDCVFLEKDTNRCR
CCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEECCCCCEE
IYPVRPMLCSTYPFYIEGLKLYTCECEGLGVHISAEESRKLAGSLLSRYVSELEDTLAMY
EEECCHHHHCCCCCEEECEEEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
EKYEDFERTEKGHEIAKNNLEKGTCIYIVHDSRGITKIID
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA