Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is lepA [C]

Identifier: 21228466

GI number: 21228466

Start: 2821477

End: 2822148

Strand: Direct

Name: lepA [C]

Synonym: MM_2364

Alternate gene names: 21228466

Gene position: 2821477-2822148 (Clockwise)

Preceding gene: 21228465

Following gene: 21228467

Centisome position: 68.88

GC content: 44.2

Gene sequence:

>672_bases
GTGTTATGCTTTTCCCAAGGGAGGGAAGCCATGAATATGATAAAACGATTTAAGGTAAGCTTTTCAAAAATGTTCAATAA
ACTGTTCAAGAAAAAAGGAGCATGTATCGGTATATACGGCCCCCCGAATGCCGGCAAGACAACCCTCAGTAACCGTATCC
TTAAAGACTGGGTAGGAAGTGATGAAACAATGGGATCGGTTTCACACATCGCCCACGAAACCAGGCACGCAAAAAGGAAA
AACGGTGTTACTATCGAAACTAACGGGCATACTATCAGCCTTGATATTGTTGACACTCCCGGGCTTGCAACAAAGATCGA
TTTCCATGACTTCATGGAACAGGGAATGAGCGATGTAGAATCAAAGAAAAGGTCCAAAGAAGCAACAGAGGGTGTAATTG
AAGCTGTAAAATGGCTTGATGACCTTGACGGAGTCATACTGGTTATGGATTCCACAGAGAACCCCTATACTCAGGTTAAT
GTAACTGTTATAGGAAATATGGAAGCTAGAAACCTTCCGCTTCTCATTGTAGCAAATAAGGTAGACCTTCCTAACGCCGA
CCCAGGAGTTATAAAGGAAGCCTTCCCTCAGCACCCTATGGTACCTGTCTCAGCGCTTGAAGGAGTGGGTATGGACTCAT
TCTATGAAGCTCTGAGCAAACAGTTCGGGTGA

Upstream 100 bases:

>100_bases
CTTAACAAGTGGAAATTATTTATATGCCAGGATTGATTAGATAAAAATATCACGAAAACACCAGTAACCCATACAGGAAA
GCAATCCGAGAAATCCTTTG

Downstream 100 bases:

>100_bases
TCCAGATGCAGGGAATCCAACTTGACCTTATATCCGAAGCCAAAATTTCTCAGATGGCTTCCATGGAAAAAGTCCGGTAT
ATAATCGATGAGGTGAGAAA

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLCFSQGREAMNMIKRFKVSFSKMFNKLFKKKGACIGIYGPPNAGKTTLSNRILKDWVGSDETMGSVSHIAHETRHAKRK
NGVTIETNGHTISLDIVDTPGLATKIDFHDFMEQGMSDVESKKRSKEATEGVIEAVKWLDDLDGVILVMDSTENPYTQVN
VTVIGNMEARNLPLLIVANKVDLPNADPGVIKEAFPQHPMVPVSALEGVGMDSFYEALSKQFG

Sequences:

>Translated_223_residues
MLCFSQGREAMNMIKRFKVSFSKMFNKLFKKKGACIGIYGPPNAGKTTLSNRILKDWVGSDETMGSVSHIAHETRHAKRK
NGVTIETNGHTISLDIVDTPGLATKIDFHDFMEQGMSDVESKKRSKEATEGVIEAVKWLDDLDGVILVMDSTENPYTQVN
VTVIGNMEARNLPLLIVANKVDLPNADPGVIKEAFPQHPMVPVSALEGVGMDSFYEALSKQFG
>Mature_223_residues
MLCFSQGREAMNMIKRFKVSFSKMFNKLFKKKGACIGIYGPPNAGKTTLSNRILKDWVGSDETMGSVSHIAHETRHAKRK
NGVTIETNGHTISLDIVDTPGLATKIDFHDFMEQGMSDVESKKRSKEATEGVIEAVKWLDDLDGVILVMDSTENPYTQVN
VTVIGNMEARNLPLLIVANKVDLPNADPGVIKEAFPQHPMVPVSALEGVGMDSFYEALSKQFG

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Present In The Cytoplasm Membrane And Is Also Found In The Periplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24561; Mature: 24561

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCFSQGREAMNMIKRFKVSFSKMFNKLFKKKGACIGIYGPPNAGKTTLSNRILKDWVGS
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCC
DETMGSVSHIAHETRHAKRKNGVTIETNGHTISLDIVDTPGLATKIDFHDFMEQGMSDVE
CCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEEEECCCCEEECCHHHHHHHHHHHHH
SKKRSKEATEGVIEAVKWLDDLDGVILVMDSTENPYTQVNVTVIGNMEARNLPLLIVANK
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECC
VDLPNADPGVIKEAFPQHPMVPVSALEGVGMDSFYEALSKQFG
CCCCCCCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLCFSQGREAMNMIKRFKVSFSKMFNKLFKKKGACIGIYGPPNAGKTTLSNRILKDWVGS
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCC
DETMGSVSHIAHETRHAKRKNGVTIETNGHTISLDIVDTPGLATKIDFHDFMEQGMSDVE
CCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEEEECCCCEEECCHHHHHHHHHHHHH
SKKRSKEATEGVIEAVKWLDDLDGVILVMDSTENPYTQVNVTVIGNMEARNLPLLIVANK
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECC
VDLPNADPGVIKEAFPQHPMVPVSALEGVGMDSFYEALSKQFG
CCCCCCCCCHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA