| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228465
Identifier: 21228465
GI number: 21228465
Start: 2819580
End: 2820500
Strand: Direct
Name: 21228465
Synonym: MM_2363
Alternate gene names: NA
Gene position: 2819580-2820500 (Clockwise)
Preceding gene: 21228461
Following gene: 21228466
Centisome position: 68.83
GC content: 45.17
Gene sequence:
>921_bases ATGGGAATTGAAACAGGGACAAGAGTCTCCATGCAGGCTCAGCCAGACGGTAAACTGCTAATCGACCCTATTCTTGAAGG ACGAACAATAAAAACAAAACGGATTGACGTAACGGGCTATGAAGCAAAAGCTCTCGAAAGGGATATTATTGCTGCGTACC TTTACGGCTATGACAGGATAGAGTTTACCTCAAAAAGAATACTCTCCGAGCAAAAACAGGTCATCAGAAAGGTTTGTTAC AAGTTAATAGGTCCTGAAATCATTGAGGAAAGCTCAAACTGTGTTGTCATCCAGGACCTTCTCAACCCAAATGAGCTCCA TATAAAAAAAGGCATACACAGGATGTTCCTGATCACAGGCTCCATGCAAAAAGATGCCATAAGAGCCCTCAAGACTGGCG ATCACGACCTTGCTCTTGATGTAAGCCAGAGGGACGACGAGGTTGACAGGTTATGCCTCCTTATTTCCAAACAATTTCGT TCCATCCTCTGCGGAGGAAGGATGCCTGATTCTGCGGAAACGAGCATAGAGGAATACCATGATTTCAGGATGGCGGCAGG TCCTATCGAAAGGATAGCGGACCACTCCCAGAGGATGGCAACCGTTGCGTCAAAAATGAAGGAGCCGGTAAGAGAAGACG TGATGGAAGTCATAGAAGACCTCAGCAGCACGTATATGAAGCTGGTAGGGCAGGCAGTGGACGCCTTGTATAACTCTGAC ACCACACTTGCTAACCAGGTAATAGACAGTATAGATGACATTCATTCACGTGTAAGAGAACTGCGTTCCTCCATTCTTAA ACTGGAGTCCCATGAAGCCATGATAGCCCTCGGGACTATAGTAGATAGCCTTTCAAGAATAGGAGATCTTGGAGCCAATA TAGCTGAAATAGCTATAAATTCTGCAATCAGGGATAAATAA
Upstream 100 bases:
>100_bases AAGCAAGCAAAAACGGGGAATCCATATAGAGACAAGAAAAGTACAGCAAACAGGCGGATCCACTTATATCATTTCCCTCC CTAAACAGTGGGCCGAAAAA
Downstream 100 bases:
>100_bases TATTCTTGTACAAATTCGTAATAATTAATAATATTTCCGCAAAAAACTCGTATACTTTCTCAAAATAAACTGATGTGCGT AACAGAAACGTTTTCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphate Uptake Regulator; Transcription Regulator; Phosphate Regulatory Protein; ABC Transport System Regulatory Protein; ABC Transporter; Phosphate Regulatory Protein-Like; SpoVT/AbrB Domain Protein; Regulatory Protein; Phosphate Transport System Protein
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGIETGTRVSMQAQPDGKLLIDPILEGRTIKTKRIDVTGYEAKALERDIIAAYLYGYDRIEFTSKRILSEQKQVIRKVCY KLIGPEIIEESSNCVVIQDLLNPNELHIKKGIHRMFLITGSMQKDAIRALKTGDHDLALDVSQRDDEVDRLCLLISKQFR SILCGGRMPDSAETSIEEYHDFRMAAGPIERIADHSQRMATVASKMKEPVREDVMEVIEDLSSTYMKLVGQAVDALYNSD TTLANQVIDSIDDIHSRVRELRSSILKLESHEAMIALGTIVDSLSRIGDLGANIAEIAINSAIRDK
Sequences:
>Translated_306_residues MGIETGTRVSMQAQPDGKLLIDPILEGRTIKTKRIDVTGYEAKALERDIIAAYLYGYDRIEFTSKRILSEQKQVIRKVCY KLIGPEIIEESSNCVVIQDLLNPNELHIKKGIHRMFLITGSMQKDAIRALKTGDHDLALDVSQRDDEVDRLCLLISKQFR SILCGGRMPDSAETSIEEYHDFRMAAGPIERIADHSQRMATVASKMKEPVREDVMEVIEDLSSTYMKLVGQAVDALYNSD TTLANQVIDSIDDIHSRVRELRSSILKLESHEAMIALGTIVDSLSRIGDLGANIAEIAINSAIRDK >Mature_305_residues GIETGTRVSMQAQPDGKLLIDPILEGRTIKTKRIDVTGYEAKALERDIIAAYLYGYDRIEFTSKRILSEQKQVIRKVCYK LIGPEIIEESSNCVVIQDLLNPNELHIKKGIHRMFLITGSMQKDAIRALKTGDHDLALDVSQRDDEVDRLCLLISKQFRS ILCGGRMPDSAETSIEEYHDFRMAAGPIERIADHSQRMATVASKMKEPVREDVMEVIEDLSSTYMKLVGQAVDALYNSDT TLANQVIDSIDDIHSRVRELRSSILKLESHEAMIALGTIVDSLSRIGDLGANIAEIAINSAIRDK
Specific function: Unknown
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34246; Mature: 34115
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIETGTRVSMQAQPDGKLLIDPILEGRTIKTKRIDVTGYEAKALERDIIAAYLYGYDRI CCCCCCCEEEEEECCCCCEEECHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHH EFTSKRILSEQKQVIRKVCYKLIGPEIIEESSNCVVIQDLLNPNELHIKKGIHRMFLITG HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEHHHCCCCHHHHHHHHHEEEEEEC SMQKDAIRALKTGDHDLALDVSQRDDEVDRLCLLISKQFRSILCGGRMPDSAETSIEEYH CCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH DFRMAAGPIERIADHSQRMATVASKMKEPVREDVMEVIEDLSSTYMKLVGQAVDALYNSD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TTLANQVIDSIDDIHSRVRELRSSILKLESHEAMIALGTIVDSLSRIGDLGANIAEIAIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAIRDK HHHCCC >Mature Secondary Structure GIETGTRVSMQAQPDGKLLIDPILEGRTIKTKRIDVTGYEAKALERDIIAAYLYGYDRI CCCCCCEEEEEECCCCCEEECHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHH EFTSKRILSEQKQVIRKVCYKLIGPEIIEESSNCVVIQDLLNPNELHIKKGIHRMFLITG HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEHHHCCCCHHHHHHHHHEEEEEEC SMQKDAIRALKTGDHDLALDVSQRDDEVDRLCLLISKQFRSILCGGRMPDSAETSIEEYH CCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH DFRMAAGPIERIADHSQRMATVASKMKEPVREDVMEVIEDLSSTYMKLVGQAVDALYNSD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TTLANQVIDSIDDIHSRVRELRSSILKLESHEAMIALGTIVDSLSRIGDLGANIAEIAIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SAIRDK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA