| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is aroK
Identifier: 21228464
GI number: 21228464
Start: 2818377
End: 2819258
Strand: Reverse
Name: aroK
Synonym: MM_2362
Alternate gene names: 21228464
Gene position: 2819258-2818377 (Counterclockwise)
Preceding gene: 21228472
Following gene: 21228463
Centisome position: 68.82
GC content: 48.64
Gene sequence:
>882_bases ATGACACTTGAAGGGCACGCCTGCGCTTTCGGAGCTGGAACGATAATAAATGCGATAGCTACATGGAAAGGCGCAGCATT TGGAATAGATCTAAAAACCTTTGCAGATGTGGAACTTTCTGAAAGCGAATCTGTGATTACCGGCTCAATCAAAGAGGTGC CTGAAGGAGATACTCGCCTTATAGAACGCTGCGTGGAACTTGTCCTTGGGAGATTCGGGCTGGAACTTGGAGGCACGATA AGGACATGGAGTGAAATCCCCCTTGCAGGAGGGCTTAAGAGCAGCAGTGCAGCAGCAAACGCTTCAGTCCTTGCGACCCT TCATGCAGTGGGGGAAACAATGCCCTCTCTTGAGATCATAAAACTGGGTGTAAGGGCTGCAAAAGAAGTGGGAGTTACTG TCACTGGAGCATTTGACGATGCCTGCGCTTCTTTTCTGGGTGGTATTGTAATTACCGATAACCGGAATATGAAACTCATC AAACGTGAAGAAGCCGATTCAAGAGTCCTTATATTCGCCCCATCAAAAAAGGCTTTCAGCGCGGACACGAATGTAAAACG TTCACGGCTGATAGCACCATATGTGGAAATGGCATACGAGCTTGCTCTCGCAGGAGATTATGAACGCGCAATGACGCTTA ACGGCTTTCTTTACTGCGGAGCTCTCGGGTTTGATACGGAGTATATGCTCAGGGCTCTGGAATGCGGAGTAAAAGGGGTC AGCCTTTCAGGGACAGGCCCTTCTTATGCAGCCCTGGTAAAAGCTGACCAGGTAAAAGAACTTAAGTCTGCGTGGGAAAG CTGCGGCATGGAGGGAAGAGTCATAGAAACCAGTATAAATAACAGTGGCGCAATATCCTTTAACAGGGAGGGGTCCTCTT GA
Upstream 100 bases:
>100_bases GTCTTTCATTACGAGGAATAAATCCAGAGTCCTGTATTTAAACCTCACTTTTCTCCGGACGGAGGTAAAAAATATTAAAG AGCAGAGCATTCTGGACGTA
Downstream 100 bases:
>100_bases GTGAACTTGAAGCTGTCCGCAAAGAAATAGAGGAGATTGACAGGGAAATCCTTTCCCTTATTGATAAAAGGGTTAACCTT GCTGAAAAAGTGCTTGAATC
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTLEGHACAFGAGTIINAIATWKGAAFGIDLKTFADVELSESESVITGSIKEVPEGDTRLIERCVELVLGRFGLELGGTI RTWSEIPLAGGLKSSSAAANASVLATLHAVGETMPSLEIIKLGVRAAKEVGVTVTGAFDDACASFLGGIVITDNRNMKLI KREEADSRVLIFAPSKKAFSADTNVKRSRLIAPYVEMAYELALAGDYERAMTLNGFLYCGALGFDTEYMLRALECGVKGV SLSGTGPSYAALVKADQVKELKSAWESCGMEGRVIETSINNSGAISFNREGSS
Sequences:
>Translated_293_residues MTLEGHACAFGAGTIINAIATWKGAAFGIDLKTFADVELSESESVITGSIKEVPEGDTRLIERCVELVLGRFGLELGGTI RTWSEIPLAGGLKSSSAAANASVLATLHAVGETMPSLEIIKLGVRAAKEVGVTVTGAFDDACASFLGGIVITDNRNMKLI KREEADSRVLIFAPSKKAFSADTNVKRSRLIAPYVEMAYELALAGDYERAMTLNGFLYCGALGFDTEYMLRALECGVKGV SLSGTGPSYAALVKADQVKELKSAWESCGMEGRVIETSINNSGAISFNREGSS >Mature_292_residues TLEGHACAFGAGTIINAIATWKGAAFGIDLKTFADVELSESESVITGSIKEVPEGDTRLIERCVELVLGRFGLELGGTIR TWSEIPLAGGLKSSSAAANASVLATLHAVGETMPSLEIIKLGVRAAKEVGVTVTGAFDDACASFLGGIVITDNRNMKLIK REEADSRVLIFAPSKKAFSADTNVKRSRLIAPYVEMAYELALAGDYERAMTLNGFLYCGALGFDTEYMLRALECGVKGVS LSGTGPSYAALVKADQVKELKSAWESCGMEGRVIETSINNSGAISFNREGSS
Specific function: Unknown
COG id: COG1685
COG function: function code EH; Archaeal shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Archaeal shikimate kinase subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROK_METMA (Q8PUH2)
Other databases:
- EMBL: AE008384 - RefSeq: NP_634386.1 - ProteinModelPortal: Q8PUH2 - GeneID: 1480704 - GenomeReviews: AE008384_GR - KEGG: mma:MM_2362 - NMPDR: fig|192952.1.peg.2362 - HOGENOM: HBG646614 - OMA: AFDDACA - ProtClustDB: PRK01123 - BioCyc: MMAZ192952:MM2362-MONOMER - BRENDA: 2.7.1.71 - GO: GO:0005737 - HAMAP: MF_00370 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR010189 - Gene3D: G3DSA:3.30.230.10 - PIRSF: PIRSF005758 - TIGRFAMs: TIGR01920
Pfam domain/function: PF00288 GHMP_kinases_N; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =2.7.1.71
Molecular weight: Translated: 30953; Mature: 30821
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEGHACAFGAGTIINAIATWKGAAFGIDLKTFADVELSESESVITGSIKEVPEGDTRL CCCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHEECCEECCCCCEEECCHHHCCCCHHHH IERCVELVLGRFGLELGGTIRTWSEIPLAGGLKSSSAAANASVLATLHAVGETMPSLEII HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH KLGVRAAKEVGVTVTGAFDDACASFLGGIVITDNRNMKLIKREEADSRVLIFAPSKKAFS HHHHHHHHHCCEEEEECCHHHHHHHHCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCC ADTNVKRSRLIAPYVEMAYELALAGDYERAMTLNGFLYCGALGFDTEYMLRALECGVKGV CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEECCEEEEEEECCCHHHHHHHHHCCCCEE SLSGTGPSYAALVKADQVKELKSAWESCGMEGRVIETSINNSGAISFNREGSS EECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCC >Mature Secondary Structure TLEGHACAFGAGTIINAIATWKGAAFGIDLKTFADVELSESESVITGSIKEVPEGDTRL CCCCCEEEECHHHHHHHHHHCCCCEEEEEHHHEECCEECCCCCEEECCHHHCCCCHHHH IERCVELVLGRFGLELGGTIRTWSEIPLAGGLKSSSAAANASVLATLHAVGETMPSLEII HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH KLGVRAAKEVGVTVTGAFDDACASFLGGIVITDNRNMKLIKREEADSRVLIFAPSKKAFS HHHHHHHHHCCEEEEECCHHHHHHHHCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCC ADTNVKRSRLIAPYVEMAYELALAGDYERAMTLNGFLYCGALGFDTEYMLRALECGVKGV CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEECCEEEEEEECCCHHHHHHHHHCCCCEE SLSGTGPSYAALVKADQVKELKSAWESCGMEGRVIETSINNSGAISFNREGSS EECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824