Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228461

Identifier: 21228461

GI number: 21228461

Start: 2816531

End: 2817208

Strand: Direct

Name: 21228461

Synonym: MM_2359

Alternate gene names: NA

Gene position: 2816531-2817208 (Clockwise)

Preceding gene: 21228460

Following gene: 21228465

Centisome position: 68.76

GC content: 48.67

Gene sequence:

>678_bases
ATGCAGATGAAACTCGCAGCACTGGTCTCTGGCGGCAAGGACTCGATCTTTGCTATCCAAAAAGCCCTTGATGAAGGGCA
TGAGGTCACCCACCTCATAAATATTATCCCGGCAAGGGACGACTCATACATGTACCACTCAATTAACCTTCACATGGTAG
AACTGATTTCTGCCGCCAGTGAAATCCCGCTGATACAGCAGCAGTCCAGCGGAATCAAAGAACTCGAACTGGACGACCTT
ACCCTTGCCCTCAGGAAAGTGAATGTCGATGGGGTGTCTGTAGGTGCTATAGAGTCTCAGTACCAGGCAAGCAGGGTTCA
GAAGATCTGCGATTCCCTGGGGCTCAAGGTCTATGCCCCACTCTGGCACAGGGATCCCGAAGAGCTCCTTAATGAGATGT
CAAAAGTTCTTGATATCAGGATTGTAAGGGTCGCAGCCGACGGTCTTGATAAGTCCTGGCTTGGGCGCCCTATTAATGTT
AATTCCATCGAAAGCCTCAAAGCTCTCAACCGCAGGCGTATGGTCCATATGGCAGGGGAAGGAGGAGAATATGAAACTGT
TGTCCTTGATGCTCCTTTCTTTAAAAAGCGCATAGAAATAGTAAAAAGCGAAATTGAATGGGAAGGCGACACCGGCACTT
TAAAGATTCTGGACGCACGACTCGTCGATAAAAACTGA

Upstream 100 bases:

>100_bases
GCTGAGAAAGGAAAGACATATAAAATATTATAATGATCCACACATTATAACTCGCGGATTATAACCTGGAAGTACAAAGA
GAATAAAACCACGGAAGAGG

Downstream 100 bases:

>100_bases
TTTCCAGGCAGTCAACAATCCTGTGAAAACAGGAAAATTTACTTTTTTAGCCTGAACTCATAAATCTGAGTGTATCCAGG
AATTTTAAATCAATCTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAASEIPLIQQQSSGIKELELDDL
TLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAPLWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINV
NSIESLKALNRRRMVHMAGEGGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN

Sequences:

>Translated_225_residues
MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAASEIPLIQQQSSGIKELELDDL
TLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAPLWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINV
NSIESLKALNRRRMVHMAGEGGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN
>Mature_225_residues
MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAASEIPLIQQQSSGIKELELDDL
TLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAPLWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINV
NSIESLKALNRRRMVHMAGEGGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN

Specific function: Unknown

COG id: COG2102

COG function: function code R; Predicted ATPases of PP-loop superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI18087809, Length=252, Percent_Identity=36.9047619047619, Blast_Score=140, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI86561065, Length=242, Percent_Identity=36.7768595041322, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6323172, Length=243, Percent_Identity=35.3909465020576, Blast_Score=133, Evalue=3e-32,
Organism=Drosophila melanogaster, GI85726382, Length=217, Percent_Identity=37.7880184331797, Blast_Score=122, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005237
- InterPro:   IPR022427
- InterPro:   IPR002761
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01902 ATP_bind_4 [H]

EC number: NA

Molecular weight: Translated: 25144; Mature: 25144

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAAS
CCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEHEEEEECCCCCEEEEECCHHHHHHHHHHH
EIPLIQQQSSGIKELELDDLTLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAP
HCCEEECCCCCCCEECHHHHHEEHEEECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEH
LWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINVNSIESLKALNRRRMVHMAGE
HHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHEEEECCC
GGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN
CCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure
MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAAS
CCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEHEEEEECCCCCEEEEECCHHHHHHHHHHH
EIPLIQQQSSGIKELELDDLTLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAP
HCCEEECCCCCCCEECHHHHHEEHEEECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEH
LWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINVNSIESLKALNRRRMVHMAGE
HHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHEEEECCC
GGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN
CCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]