| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228461
Identifier: 21228461
GI number: 21228461
Start: 2816531
End: 2817208
Strand: Direct
Name: 21228461
Synonym: MM_2359
Alternate gene names: NA
Gene position: 2816531-2817208 (Clockwise)
Preceding gene: 21228460
Following gene: 21228465
Centisome position: 68.76
GC content: 48.67
Gene sequence:
>678_bases ATGCAGATGAAACTCGCAGCACTGGTCTCTGGCGGCAAGGACTCGATCTTTGCTATCCAAAAAGCCCTTGATGAAGGGCA TGAGGTCACCCACCTCATAAATATTATCCCGGCAAGGGACGACTCATACATGTACCACTCAATTAACCTTCACATGGTAG AACTGATTTCTGCCGCCAGTGAAATCCCGCTGATACAGCAGCAGTCCAGCGGAATCAAAGAACTCGAACTGGACGACCTT ACCCTTGCCCTCAGGAAAGTGAATGTCGATGGGGTGTCTGTAGGTGCTATAGAGTCTCAGTACCAGGCAAGCAGGGTTCA GAAGATCTGCGATTCCCTGGGGCTCAAGGTCTATGCCCCACTCTGGCACAGGGATCCCGAAGAGCTCCTTAATGAGATGT CAAAAGTTCTTGATATCAGGATTGTAAGGGTCGCAGCCGACGGTCTTGATAAGTCCTGGCTTGGGCGCCCTATTAATGTT AATTCCATCGAAAGCCTCAAAGCTCTCAACCGCAGGCGTATGGTCCATATGGCAGGGGAAGGAGGAGAATATGAAACTGT TGTCCTTGATGCTCCTTTCTTTAAAAAGCGCATAGAAATAGTAAAAAGCGAAATTGAATGGGAAGGCGACACCGGCACTT TAAAGATTCTGGACGCACGACTCGTCGATAAAAACTGA
Upstream 100 bases:
>100_bases GCTGAGAAAGGAAAGACATATAAAATATTATAATGATCCACACATTATAACTCGCGGATTATAACCTGGAAGTACAAAGA GAATAAAACCACGGAAGAGG
Downstream 100 bases:
>100_bases TTTCCAGGCAGTCAACAATCCTGTGAAAACAGGAAAATTTACTTTTTTAGCCTGAACTCATAAATCTGAGTGTATCCAGG AATTTTAAATCAATCTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAASEIPLIQQQSSGIKELELDDL TLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAPLWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINV NSIESLKALNRRRMVHMAGEGGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN
Sequences:
>Translated_225_residues MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAASEIPLIQQQSSGIKELELDDL TLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAPLWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINV NSIESLKALNRRRMVHMAGEGGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN >Mature_225_residues MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAASEIPLIQQQSSGIKELELDDL TLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAPLWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINV NSIESLKALNRRRMVHMAGEGGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN
Specific function: Unknown
COG id: COG2102
COG function: function code R; Predicted ATPases of PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI18087809, Length=252, Percent_Identity=36.9047619047619, Blast_Score=140, Evalue=7e-34, Organism=Caenorhabditis elegans, GI86561065, Length=242, Percent_Identity=36.7768595041322, Blast_Score=130, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6323172, Length=243, Percent_Identity=35.3909465020576, Blast_Score=133, Evalue=3e-32, Organism=Drosophila melanogaster, GI85726382, Length=217, Percent_Identity=37.7880184331797, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005237 - InterPro: IPR022427 - InterPro: IPR002761 - InterPro: IPR014729 [H]
Pfam domain/function: PF01902 ATP_bind_4 [H]
EC number: NA
Molecular weight: Translated: 25144; Mature: 25144
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAAS CCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEHEEEEECCCCCEEEEECCHHHHHHHHHHH EIPLIQQQSSGIKELELDDLTLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAP HCCEEECCCCCCCEECHHHHHEEHEEECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEH LWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINVNSIESLKALNRRRMVHMAGE HHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHEEEECCC GGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN CCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC >Mature Secondary Structure MQMKLAALVSGGKDSIFAIQKALDEGHEVTHLINIIPARDDSYMYHSINLHMVELISAAS CCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEHEEEEECCCCCEEEEECCHHHHHHHHHHH EIPLIQQQSSGIKELELDDLTLALRKVNVDGVSVGAIESQYQASRVQKICDSLGLKVYAP HCCEEECCCCCCCEECHHHHHEEHEEECCCCEEECCHHHHHHHHHHHHHHHHCCCEEEEH LWHRDPEELLNEMSKVLDIRIVRVAADGLDKSWLGRPINVNSIESLKALNRRRMVHMAGE HHCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHEEEECCC GGEYETVVLDAPFFKKRIEIVKSEIEWEGDTGTLKILDARLVDKN CCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]