| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228459
Identifier: 21228459
GI number: 21228459
Start: 2814849
End: 2815238
Strand: Direct
Name: 21228459
Synonym: MM_2357
Alternate gene names: NA
Gene position: 2814849-2815238 (Clockwise)
Preceding gene: 21228458
Following gene: 21228460
Centisome position: 68.72
GC content: 45.13
Gene sequence:
>390_bases ATGAAGAACTTTCATGTGGTACTTGAAGCAGCTTGGTTGGTTAGAGATGTAAAAACGGCTGATGATGCGATAGGGGTTGC AATTTCCGAGGCTGGAAAGCGCCTGAACCCCAAACTCGATTTTGTAGAGGTAGATGTGGGAACCACATCCTGCCCGGTAT GCGGTGAGCCTTTTAGCAGTGTTTTTATAGCAGCAAACACAGCACTTGTAGGGCTTATTTTCGAAATGAAGGTTTTTGAT GCCGAATCTGCAGAACATGCAGAAAGGATTGCAAAATCCGTCATAGGGAAGTCTCTCCGCGATGTTCCGTTGACAGTTGT CGAAGTTACGGAATTTGAACGGTCAGTCGAAAAAGGTGAACAGCAGCAAAAAGGCAAGGCAAACAAATAA
Upstream 100 bases:
>100_bases GCCAGAATAATTAACATACTTTACTCTATTCTTTAGATTTCAATATTTTTCCCTATTCCGGGATAGTTAAAAACGTATAC TATAATTACGGTGGACAATT
Downstream 100 bases:
>100_bases ACAGGCTTCCTTCCTTTATGTGTGATGTGCCGCGGCAGAGGAAGGTGTACCTGTACGACTTCTTATTATGCAGGCAGCTT TGCGTAGCCAGGGATCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSSVFIAANTALVGLIFEMKVFD AESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGEQQQKGKANK
Sequences:
>Translated_129_residues MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSSVFIAANTALVGLIFEMKVFD AESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGEQQQKGKANK >Mature_129_residues MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSSVFIAANTALVGLIFEMKVFD AESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGEQQQKGKANK
Specific function: Unknown
COG id: COG1885
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0212 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007564 - ProDom: PD020367 [H]
Pfam domain/function: PF04475 DUF555 [H]
EC number: NA
Molecular weight: Translated: 14005; Mature: 14005
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSS CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHH VFIAANTALVGLIFEMKVFDAESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGE EEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHCCCCEEEEHHHHHHHHHHHHH QQQKGKANK HHHCCCCCC >Mature Secondary Structure MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSS CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHH VFIAANTALVGLIFEMKVFDAESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGE EEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHCCCCEEEEHHHHHHHHHHHHH QQQKGKANK HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]