Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228458

Identifier: 21228458

GI number: 21228458

Start: 2814326

End: 2814607

Strand: Direct

Name: 21228458

Synonym: MM_2356

Alternate gene names: NA

Gene position: 2814326-2814607 (Clockwise)

Preceding gene: 21228457

Following gene: 21228459

Centisome position: 68.7

GC content: 43.62

Gene sequence:

>282_bases
ATGCCTGCCGATTTGAATGAAAAGGTTAACCGGTACGAAGATATGTTAAAAAGAGCACTGCAAAAAGCAAAGTATGCTCC
GATCCCGAACTCCCATATGCATGAGGTAGCAAAGGATTACTATACAATGGCAGAAGCTTACTATAAAGATGGAATCTACT
TTCTTGAAAACGGGGATCCTGTAAATGCCCTCGCTTCCTTCAGTTACGGGCATGCCTGGCTCGATGCAGGAGCAAAACTC
GGGGTTTTCGCGGTGGATGATGAAACCCTTTTTACAATATAA

Upstream 100 bases:

>100_bases
GATGGGCCTGAAGAAATCATGGAAAACATTGAATGAAACTGAAAAAAATCTGTTGAGCAAAGAATAGCTGAATTACTGTA
TACACTTTCTGGTGGTCAAA

Downstream 100 bases:

>100_bases
ATAAGGCACTGAGACTTATTACAGAAAATTAAAACTATAAATTACAGAAAATTAAAACTATAATTCAAATTAAAAATCCA
AAAGATTAAACTGAAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MPADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDPVNALASFSYGHAWLDAGAKL
GVFAVDDETLFTI

Sequences:

>Translated_93_residues
MPADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDPVNALASFSYGHAWLDAGAKL
GVFAVDDETLFTI
>Mature_92_residues
PADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDPVNALASFSYGHAWLDAGAKLG
VFAVDDETLFTI

Specific function: Unknown

COG id: COG1849

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023140 [H]

Pfam domain/function: PF04010 DUF357 [H]

EC number: NA

Molecular weight: Translated: 10541; Mature: 10410

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDP
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
VNALASFSYGHAWLDAGAKLGVFAVDDETLFTI
HHHHHHCCCCHHHHCCCCCCCEEEECCCEEECC
>Mature Secondary Structure 
PADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
VNALASFSYGHAWLDAGAKLGVFAVDDETLFTI
HHHHHHCCCCHHHHCCCCCCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]