| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228458
Identifier: 21228458
GI number: 21228458
Start: 2814326
End: 2814607
Strand: Direct
Name: 21228458
Synonym: MM_2356
Alternate gene names: NA
Gene position: 2814326-2814607 (Clockwise)
Preceding gene: 21228457
Following gene: 21228459
Centisome position: 68.7
GC content: 43.62
Gene sequence:
>282_bases ATGCCTGCCGATTTGAATGAAAAGGTTAACCGGTACGAAGATATGTTAAAAAGAGCACTGCAAAAAGCAAAGTATGCTCC GATCCCGAACTCCCATATGCATGAGGTAGCAAAGGATTACTATACAATGGCAGAAGCTTACTATAAAGATGGAATCTACT TTCTTGAAAACGGGGATCCTGTAAATGCCCTCGCTTCCTTCAGTTACGGGCATGCCTGGCTCGATGCAGGAGCAAAACTC GGGGTTTTCGCGGTGGATGATGAAACCCTTTTTACAATATAA
Upstream 100 bases:
>100_bases GATGGGCCTGAAGAAATCATGGAAAACATTGAATGAAACTGAAAAAAATCTGTTGAGCAAAGAATAGCTGAATTACTGTA TACACTTTCTGGTGGTCAAA
Downstream 100 bases:
>100_bases ATAAGGCACTGAGACTTATTACAGAAAATTAAAACTATAAATTACAGAAAATTAAAACTATAATTCAAATTAAAAATCCA AAAGATTAAACTGAAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MPADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDPVNALASFSYGHAWLDAGAKL GVFAVDDETLFTI
Sequences:
>Translated_93_residues MPADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDPVNALASFSYGHAWLDAGAKL GVFAVDDETLFTI >Mature_92_residues PADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDPVNALASFSYGHAWLDAGAKLG VFAVDDETLFTI
Specific function: Unknown
COG id: COG1849
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023140 [H]
Pfam domain/function: PF04010 DUF357 [H]
EC number: NA
Molecular weight: Translated: 10541; Mature: 10410
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCC VNALASFSYGHAWLDAGAKLGVFAVDDETLFTI HHHHHHCCCCHHHHCCCCCCCEEEECCCEEECC >Mature Secondary Structure PADLNEKVNRYEDMLKRALQKAKYAPIPNSHMHEVAKDYYTMAEAYYKDGIYFLENGDP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCC VNALASFSYGHAWLDAGAKLGVFAVDDETLFTI HHHHHHCCCCHHHHCCCCCCCEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]