Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228459

Identifier: 21228459

GI number: 21228459

Start: 2814849

End: 2815238

Strand: Direct

Name: 21228459

Synonym: MM_2357

Alternate gene names: NA

Gene position: 2814849-2815238 (Clockwise)

Preceding gene: 21228458

Following gene: 21228460

Centisome position: 68.72

GC content: 45.13

Gene sequence:

>390_bases
ATGAAGAACTTTCATGTGGTACTTGAAGCAGCTTGGTTGGTTAGAGATGTAAAAACGGCTGATGATGCGATAGGGGTTGC
AATTTCCGAGGCTGGAAAGCGCCTGAACCCCAAACTCGATTTTGTAGAGGTAGATGTGGGAACCACATCCTGCCCGGTAT
GCGGTGAGCCTTTTAGCAGTGTTTTTATAGCAGCAAACACAGCACTTGTAGGGCTTATTTTCGAAATGAAGGTTTTTGAT
GCCGAATCTGCAGAACATGCAGAAAGGATTGCAAAATCCGTCATAGGGAAGTCTCTCCGCGATGTTCCGTTGACAGTTGT
CGAAGTTACGGAATTTGAACGGTCAGTCGAAAAAGGTGAACAGCAGCAAAAAGGCAAGGCAAACAAATAA

Upstream 100 bases:

>100_bases
GCCAGAATAATTAACATACTTTACTCTATTCTTTAGATTTCAATATTTTTCCCTATTCCGGGATAGTTAAAAACGTATAC
TATAATTACGGTGGACAATT

Downstream 100 bases:

>100_bases
ACAGGCTTCCTTCCTTTATGTGTGATGTGCCGCGGCAGAGGAAGGTGTACCTGTACGACTTCTTATTATGCAGGCAGCTT
TGCGTAGCCAGGGATCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSSVFIAANTALVGLIFEMKVFD
AESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGEQQQKGKANK

Sequences:

>Translated_129_residues
MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSSVFIAANTALVGLIFEMKVFD
AESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGEQQQKGKANK
>Mature_129_residues
MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSSVFIAANTALVGLIFEMKVFD
AESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGEQQQKGKANK

Specific function: Unknown

COG id: COG1885

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0212 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007564
- ProDom:   PD020367 [H]

Pfam domain/function: PF04475 DUF555 [H]

EC number: NA

Molecular weight: Translated: 14005; Mature: 14005

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSS
CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
VFIAANTALVGLIFEMKVFDAESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGE
EEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHCCCCEEEEHHHHHHHHHHHHH
QQQKGKANK
HHHCCCCCC
>Mature Secondary Structure
MKNFHVVLEAAWLVRDVKTADDAIGVAISEAGKRLNPKLDFVEVDVGTTSCPVCGEPFSS
CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
VFIAANTALVGLIFEMKVFDAESAEHAERIAKSVIGKSLRDVPLTVVEVTEFERSVEKGE
EEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHCCCCEEEEHHHHHHHHHHHHH
QQQKGKANK
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]