Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228454

Identifier: 21228454

GI number: 21228454

Start: 2811477

End: 2811758

Strand: Direct

Name: 21228454

Synonym: MM_2352

Alternate gene names: NA

Gene position: 2811477-2811758 (Clockwise)

Preceding gene: 21228451

Following gene: 21228457

Centisome position: 68.63

GC content: 41.13

Gene sequence:

>282_bases
ATGGATCCACTTGAAAAGATTTTTGGAAAGACTGCACAGATGACCGTCCTTAAAAACCTCATCGAGCACCAGAATGAATC
AACGTATTTATCTGGAATAGCAGAAGAAACAGGCCTGTCGCACTCCAGCGTGTCAAGAGTAATTACCCCTCTAATAGAGT
CGGGTATTGTAATAGAAAAACCTCTCGGCAAGCAGATCCGGACCTTCCAGCTGAACATGGAAAGCGACGCGACAAAATTG
ATTATAGATTTTTACAATAAAATCAATCAGATGCTGGAATAA

Upstream 100 bases:

>100_bases
TGATCACCCAATTGGGAGATAAGTTTATAGCCATAAATAGCAAGTTAATATTGGAAATAAGAATCACTTACGGAGAACAG
CCACCTCTGAGATGATAACA

Downstream 100 bases:

>100_bases
ACCTGAAATAGATCCCTGACGTCTGAGCCAGGACAGCAAGATTTTCTGTCCTTTCTAGTTTGCAAAAATAGTGTTCACTT
TGTATAGTGTTCACTTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MDPLEKIFGKTAQMTVLKNLIEHQNESTYLSGIAEETGLSHSSVSRVITPLIESGIVIEKPLGKQIRTFQLNMESDATKL
IIDFYNKINQMLE

Sequences:

>Translated_93_residues
MDPLEKIFGKTAQMTVLKNLIEHQNESTYLSGIAEETGLSHSSVSRVITPLIESGIVIEKPLGKQIRTFQLNMESDATKL
IIDFYNKINQMLE
>Mature_93_residues
MDPLEKIFGKTAQMTVLKNLIEHQNESTYLSGIAEETGLSHSSVSRVITPLIESGIVIEKPLGKQIRTFQLNMESDATKL
IIDFYNKINQMLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10480; Mature: 10480

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLEKIFGKTAQMTVLKNLIEHQNESTYLSGIAEETGLSHSSVSRVITPLIESGIVIEK
CCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEC
PLGKQIRTFQLNMESDATKLIIDFYNKINQMLE
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDPLEKIFGKTAQMTVLKNLIEHQNESTYLSGIAEETGLSHSSVSRVITPLIESGIVIEK
CCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEC
PLGKQIRTFQLNMESDATKLIIDFYNKINQMLE
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA