| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is ubiE [H]
Identifier: 21228410
GI number: 21228410
Start: 2763886
End: 2764494
Strand: Direct
Name: ubiE [H]
Synonym: MM_2308
Alternate gene names: 21228410
Gene position: 2763886-2764494 (Clockwise)
Preceding gene: 21228406
Following gene: 21228412
Centisome position: 67.47
GC content: 44.17
Gene sequence:
>609_bases ATGTTCACAATGTCCGCAGCCTCAAAATACAACCGGATAGCGCCCGTTTATGAACTGCTAGACCTGCCACTTGAATTTTT CTTTTTCCGGAAATGGAGAAAAGAAGCACTTTCAGGCCTTAGCGGAAAAGTTCTGGAAATCGGGGTAGGAAGCGGAAGGA ACCTGAAATACTATCCAGCAGGCTGTTCTGTAACGGGAATCGATGCCAGTGAGGGTATGCTCGAAAAAGCCAGGCAGAAA ACCGGGGGAGTGAAAAACGTCAATCTTCTTCTGATGGACGCAGAACATCTTGAATTTCCGGACAAGAGCTTTGATTATGT AATTGCGACTTTTGTCCTCTGCACAATCCCTGATCCTGTAATAGCTCTTAAAGAAATGAGGCGTGTCCTTAAACCTTCAG GTGAACTTATAGCCCTTGAGCACATGCACAGCAGTAACTCAATTATTTCTCTTTTTGAGCACATGATCGATCCTTTTCTG TTTTTCCTGCTTGGGGACCATACCACACGGCAGACGGTTAAAAATATACAGAAGGCGGGCTTTACCATTCTGGAGGCAAA AAAACTGGCTTTTAAGGATATTTTCCGAAAAATCAGGGCAAAACCGTAA
Upstream 100 bases:
>100_bases TTCAAATACTTAAATATGAATCGGTTTTCGGGAGTTTTCCGGGTAAAACCGTAAAAGGTTTAATTCTGAGCACTTTGTTA TAATATCCACACCCTTAAAG
Downstream 100 bases:
>100_bases AAGGCTTTTCTTTTTACGTTATATTTTTATAATGTTTACTTTTATCTGCTTTTAGCATGTCCTTTTTTCACTTTAAAACA CTATTAAAATGAACCCTGTA
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MFTMSAASKYNRIAPVYELLDLPLEFFFFRKWRKEALSGLSGKVLEIGVGSGRNLKYYPAGCSVTGIDASEGMLEKARQK TGGVKNVNLLLMDAEHLEFPDKSFDYVIATFVLCTIPDPVIALKEMRRVLKPSGELIALEHMHSSNSIISLFEHMIDPFL FFLLGDHTTRQTVKNIQKAGFTILEAKKLAFKDIFRKIRAKP
Sequences:
>Translated_202_residues MFTMSAASKYNRIAPVYELLDLPLEFFFFRKWRKEALSGLSGKVLEIGVGSGRNLKYYPAGCSVTGIDASEGMLEKARQK TGGVKNVNLLLMDAEHLEFPDKSFDYVIATFVLCTIPDPVIALKEMRRVLKPSGELIALEHMHSSNSIISLFEHMIDPFL FFLLGDHTTRQTVKNIQKAGFTILEAKKLAFKDIFRKIRAKP >Mature_202_residues MFTMSAASKYNRIAPVYELLDLPLEFFFFRKWRKEALSGLSGKVLEIGVGSGRNLKYYPAGCSVTGIDASEGMLEKARQK TGGVKNVNLLLMDAEHLEFPDKSFDYVIATFVLCTIPDPVIALKEMRRVLKPSGELIALEHMHSSNSIISLFEHMIDPFL FFLLGDHTTRQTVKNIQKAGFTILEAKKLAFKDIFRKIRAKP
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Homo sapiens, GI164663805, Length=163, Percent_Identity=32.5153374233129, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI89145417, Length=163, Percent_Identity=31.9018404907975, Blast_Score=87, Evalue=9e-18, Organism=Escherichia coli, GI48994983, Length=169, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320522, Length=160, Percent_Identity=31.25, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.-
Molecular weight: Translated: 22805; Mature: 22805
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTMSAASKYNRIAPVYELLDLPLEFFFFRKWRKEALSGLSGKVLEIGVGSGRNLKYYPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECC GCSVTGIDASEGMLEKARQKTGGVKNVNLLLMDAEHLEFPDKSFDYVIATFVLCTIPDPV CCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCHH IALKEMRRVLKPSGELIALEHMHSSNSIISLFEHMIDPFLFFLLGDHTTRQTVKNIQKAG HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC FTILEAKKLAFKDIFRKIRAKP CHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFTMSAASKYNRIAPVYELLDLPLEFFFFRKWRKEALSGLSGKVLEIGVGSGRNLKYYPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECC GCSVTGIDASEGMLEKARQKTGGVKNVNLLLMDAEHLEFPDKSFDYVIATFVLCTIPDPV CCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCHH IALKEMRRVLKPSGELIALEHMHSSNSIISLFEHMIDPFLFFLLGDHTTRQTVKNIQKAG HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC FTILEAKKLAFKDIFRKIRAKP CHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA