Click here to switch to the map view.

The map label for this gene is 21228398

Identifier: 21228398

GI number: 21228398

Start: 2742809

End: 2743987

Strand: Reverse

Name: 21228398

Synonym: MM_2296

Alternate gene names: NA

Gene position: 2743987-2742809 (Counterclockwise)

Preceding gene: 21228399

Following gene: 21228396

Centisome position: 66.99

GC content: 38.85

Gene sequence:

>1179_bases
ATGAAAACTAATGAAACCTCATATTCAATATTGCTGACATTAACAGTATTGATATTATTTTTAATTCTTGTATCATCTAC
GGCATCAGCAGCTGCCGGACAAAGAGTTTCACCTGAGCTCAATGAAACTAAGCTCACTACAAGCGGATCAGCGGGTTTTC
CTGACATCTACGGCGACAGGATAGTGTATATGGATTGGCGCAATAAAGCCGAGATCTCTGATATCTATGTGTACGATCTT
TCTACAGGAAAGGAAATTAAGATTACTACCAGCGAATTAGCACTCAATCCCAAAATCTATGGTGATAGGGTAGTGTATTG
TAATATGAGTGGTGAAATGAGTGGTATTTACCTGTATAATCTCTCCACTAATAATGAAACTCGAGTTTCTACCAGCGGAA
TGGGAATATACACCTCTATCTATGGAGATAGGATAGTTTATTTGAATGAACTAGCTGGAAATGATATCTACACCTATGAT
CTTTCTACAAAAAAGGAAACCCGAATAACTACCAATGGGTCAGCAGCAATTCCTTCCATTTACGGTGATAAAATAGTATA
CCACGATTGGCGCAATGGATTCCTCAAATACTCTGATATCTACATGTATGATCTCTCCACTTCCACGGAAACTCGAATCA
CCAGCAGTGGATCAGCATTACTTCCTGCTATCTACGATGACAGGATAGTGTATTATGACCAGAGTAATGGAAAATACGAT
ATTTACATGTACGATCTCTCTACAAATAAAGAAACTAAAATTACCAACAATGAAACTGCAAATGGAACTCATCCCCTGTA
TGGTACTCTTGCCATGTATGGTGACAGGATAATATGGCTGGAGCGGTCATCAGTTGAGGATTTGCAGCCCGGTGAAGACC
TGTATTTTAATATCCATATTTACGATCTCTCGACTTCCAGTGGAGTCCGGATCTCCACCAGTAGAGATCTTATTAATTAT
CTTGATATCTACGATAACAGGATAGTATGGAGTAGCGATAATCGGACTGACATTAGCAATTCAACAGTTGATATCTATAT
GTGCACCATTTCAGAAGAGGATAAGGGATCGAATGACAAACGGCAATCCCGGATGGAAAAAAATAAAAGTATGCCTGGGT
TTGACATTGTTGGTTGTATTACCTGTCTCTTTGGAGTATTCATGTACAGGAGAAAATAG

Upstream 100 bases:

>100_bases
CATTTTTCGTTACAAATTTTATAAATTTAGAATATAAATAAAAAAATTTAAATTAGTTGTAAAGTTTTAGCATTAAATTA
CAAAATAATAAAGAGGTATT

Downstream 100 bases:

>100_bases
AGATAAAGTAAATTATAGGCAGGTAGCGAGATTGTTAAGTCTATCAAAAAAGGCTTTAATTTTGAGAACCAAGTAAAAAA
CAGAAAACGACTTCTCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: PKD Domain-Containing Protein; Ig Domain-Containing Protein

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKTNETSYSILLTLTVLILFLILVSSTASAAAGQRVSPELNETKLTTSGSAGFPDIYGDRIVYMDWRNKAEISDIYVYDL
STGKEIKITTSELALNPKIYGDRVVYCNMSGEMSGIYLYNLSTNNETRVSTSGMGIYTSIYGDRIVYLNELAGNDIYTYD
LSTKKETRITTNGSAAIPSIYGDKIVYHDWRNGFLKYSDIYMYDLSTSTETRITSSGSALLPAIYDDRIVYYDQSNGKYD
IYMYDLSTNKETKITNNETANGTHPLYGTLAMYGDRIIWLERSSVEDLQPGEDLYFNIHIYDLSTSSGVRISTSRDLINY
LDIYDNRIVWSSDNRTDISNSTVDIYMCTISEEDKGSNDKRQSRMEKNKSMPGFDIVGCITCLFGVFMYRRK

Sequences:

>Translated_392_residues
MKTNETSYSILLTLTVLILFLILVSSTASAAAGQRVSPELNETKLTTSGSAGFPDIYGDRIVYMDWRNKAEISDIYVYDL
STGKEIKITTSELALNPKIYGDRVVYCNMSGEMSGIYLYNLSTNNETRVSTSGMGIYTSIYGDRIVYLNELAGNDIYTYD
LSTKKETRITTNGSAAIPSIYGDKIVYHDWRNGFLKYSDIYMYDLSTSTETRITSSGSALLPAIYDDRIVYYDQSNGKYD
IYMYDLSTNKETKITNNETANGTHPLYGTLAMYGDRIIWLERSSVEDLQPGEDLYFNIHIYDLSTSSGVRISTSRDLINY
LDIYDNRIVWSSDNRTDISNSTVDIYMCTISEEDKGSNDKRQSRMEKNKSMPGFDIVGCITCLFGVFMYRRK
>Mature_392_residues
MKTNETSYSILLTLTVLILFLILVSSTASAAAGQRVSPELNETKLTTSGSAGFPDIYGDRIVYMDWRNKAEISDIYVYDL
STGKEIKITTSELALNPKIYGDRVVYCNMSGEMSGIYLYNLSTNNETRVSTSGMGIYTSIYGDRIVYLNELAGNDIYTYD
LSTKKETRITTNGSAAIPSIYGDKIVYHDWRNGFLKYSDIYMYDLSTSTETRITSSGSALLPAIYDDRIVYYDQSNGKYD
IYMYDLSTNKETKITNNETANGTHPLYGTLAMYGDRIIWLERSSVEDLQPGEDLYFNIHIYDLSTSSGVRISTSRDLINY
LDIYDNRIVWSSDNRTDISNSTVDIYMCTISEEDKGSNDKRQSRMEKNKSMPGFDIVGCITCLFGVFMYRRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44412; Mature: 44412

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNETSYSILLTLTVLILFLILVSSTASAAAGQRVSPELNETKLTTSGSAGFPDIYGDR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCE
IVYMDWRNKAEISDIYVYDLSTGKEIKITTSELALNPKIYGDRVVYCNMSGEMSGIYLYN
EEEEECCCCCCEEEEEEEECCCCCEEEEEHHHEEECCEECCCEEEEEECCCCCCEEEEEE
LSTNNETRVSTSGMGIYTSIYGDRIVYLNELAGNDIYTYDLSTKKETRITTNGSAAIPSI
ECCCCCCEEEECCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCC
YGDKIVYHDWRNGFLKYSDIYMYDLSTSTETRITSSGSALLPAIYDDRIVYYDQSNGKYD
CCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCEEEEEEECCEEEEEECCCCEEE
IYMYDLSTNKETKITNNETANGTHPLYGTLAMYGDRIIWLERSSVEDLQPGEDLYFNIHI
EEEEEECCCCCEEECCCCCCCCCCCCEEEHHHHCCEEEEEECCCCCCCCCCCCEEEEEEE
YDLSTSSGVRISTSRDLINYLDIYDNRIVWSSDNRTDISNSTVDIYMCTISEEDKGSNDK
EEECCCCCEEEECCHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHH
RQSRMEKNKSMPGFDIVGCITCLFGVFMYRRK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTNETSYSILLTLTVLILFLILVSSTASAAAGQRVSPELNETKLTTSGSAGFPDIYGDR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCE
IVYMDWRNKAEISDIYVYDLSTGKEIKITTSELALNPKIYGDRVVYCNMSGEMSGIYLYN
EEEEECCCCCCEEEEEEEECCCCCEEEEEHHHEEECCEECCCEEEEEECCCCCCEEEEEE
LSTNNETRVSTSGMGIYTSIYGDRIVYLNELAGNDIYTYDLSTKKETRITTNGSAAIPSI
ECCCCCCEEEECCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCC
YGDKIVYHDWRNGFLKYSDIYMYDLSTSTETRITSSGSALLPAIYDDRIVYYDQSNGKYD
CCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCEEEEEEECCEEEEEECCCCEEE
IYMYDLSTNKETKITNNETANGTHPLYGTLAMYGDRIIWLERSSVEDLQPGEDLYFNIHI
EEEEEECCCCCEEECCCCCCCCCCCCEEEHHHHCCEEEEEECCCCCCCCCCCCEEEEEEE
YDLSTSSGVRISTSRDLINYLDIYDNRIVWSSDNRTDISNSTVDIYMCTISEEDKGSNDK
EEECCCCCEEEECCHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHH
RQSRMEKNKSMPGFDIVGCITCLFGVFMYRRK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA