Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228399

Identifier: 21228399

GI number: 21228399

Start: 2744419

End: 2746356

Strand: Reverse

Name: 21228399

Synonym: MM_2297

Alternate gene names: NA

Gene position: 2746356-2744419 (Counterclockwise)

Preceding gene: 21228400

Following gene: 21228398

Centisome position: 67.04

GC content: 47.52

Gene sequence:

>1938_bases
ATGGAAGAAAGCGGCTGGTATGTAAGAGCCTGTAAATCCACAGCAAAACAATGGGAATGGGCTATCCCTAACCCTCAGGC
CTTCAGCAGGAAATGTGAAAAAAGCGTGAGCCCTGAATACAGGGATGCCCTCAGGTTTACAGGTTTTGATCTGGAAGCCT
TTGAGACCGTACTGTTTTCTTACGCCGGGACATTTGTGGCTTTAATCCTGCTGCTCGGGATAGATTTTTTCCTGCTCCTT
TCCAGAAGTTTTGATTCTAAATCTCTTTTCATAATGGGGACCCTGACTTTTATTATTCCGCTGATAGTTCTCTACTACCT
TAGCGAATATGTGAAGATAAAAGCCGGATTGATGAAAATATCCTCTCTTGGAGATATTCCGGAAATACTGAGCTATATTA
TCATGTCAATGAAGCTGGTCCCAAACCTTGAACACGCCGTCCTTTTTGCAGCCCGGAACTCCGGGAGACCTCTTGCCACG
GACTTAAAAAAACTTACCTGGGACCTGAATTTAAGAATCTACAGCAGCATGGACGATGCCCTTCTATCTTTTGCCGACCT
GTGGGGCAGAAACAGCGAATACTTCAAGCGTTCCCTGCACCTTATCAAGAGCTCAACAGCCGAACCCGACGAAGCCCAGA
GGGTCATTACCCTGAACCGCGCCCTCGATATTAGCCTTGAAGGGACTGAAAACCTGATGGAAGCTTTTGCCGAAAAGCTG
AAGACTCCAAGTTACATCCTCTACTCAATTTTTATCCTGATCCCGCTCGCCCTTGTTGCACTCCTGCCTGCAGTAACGGT
TGTAGGGATGAAACCAAAAACCTCTGACCTTGTCCTTCTCTACGACTTTATTTTTCCACTCCTTGCAGCGGTCTATTCAG
AGTATATCCTGATGCAGAGACCTGTCGCATTTGCCCCGAGAAAAATTCCAGACACCCATCCCGATCTTGCAGATATAAAG
CAGAAGAAGCGAACTGCCATACTCACAGGAGCCCTGGTCTGTGCATTGACGGCTCCTCTGGGCTATATTCTTCTGGCTTC
GGGAAACCCCGGTGGAATAGTTTCCACAAACCCTCTAGAGGGATACCTTCTTCCAGCCCTTCCTTTAGTTATTGGAGGAA
CTGCGGGACTTTCAATCTACCTGTACTTTTCATCTCTTCCGTACAAGAAAATAAGAGACAGAATAAAACAGATGGAGCAG
GAGTTTGCAGACTCCCTTTTTGTGCTCGGCAGAAGGATTTCGGAAGGGAAAGCACCTGAAGAAGCCTTTGCCCATACTGC
AAGGACGATGGAAGGCTCAAAAATAGGGGAAGCCTATGAGGGAATTTCCATGAACCTGCTCAGTATGAGGACAAACCTCA
AAGACGCCGTTTTTGACGAAGAATTTGGGGCTTTCAGGCACGTATATTCCGAGAGGATAAGGAACACCATGCTCCTCTTT
ACGGAAAGCGTCCACAAAAACCACGAGGCTGCAGGTGCTTCGATTATCAAGCTTGCAGACCATTTAAAAGAACTCAGCGA
CGTAGAAGAGCGAATCAGGCGTTCCCTTTATGACGTCACCTCAACAATGCGTACCACCGCTGCGATTTTTGCGCCCCTTA
TTGCAGGAATTACCCTTGCCCTTTCCGAAGTTATTACAAAAATCCTGAACCAGGTAGCAGAAAGGGTGAGCAGGGTCCCG
GCAGACCTTTCCGGAATGCCCGTAGAAATCAGCCCTGAAACTTTCTCTCAGTCAATTCCTCCGGACCAGTTCCTGCTTAC
GATAGGTGTCTACATTGTCCTTATCAGTGCAATCCTTACCCGCTTTGCAGGAGCCATAGAATATGGAGGAGAACGTGCGC
AGTTGAAATACGACCTCGCCTGTATGCTTCCGGTAACTGTGGTCATCTTTGCGGTTTCAGCTGCTGCTTCAAGGGTTATT
TTCGAAGGGCTGGTATGA

Upstream 100 bases:

>100_bases
GGAAAGCAGAGATTGGGAGTTCACCTGTCTGGAGAAAAAGCACAATCAGAGGAAAAACAGAGTCCAGAAACAAAAATAAT
TGCCTGAGGGGTCATGAAAG

Downstream 100 bases:

>100_bases
AAAGAGAAAAATAAGTCGGAAATAAATAGCAGCAGCTTCCTGAACTATTATAAATTCGAACCAAGTTTCTATACATGATA
TATTAAATCGGTCAATTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MEESGWYVRACKSTAKQWEWAIPNPQAFSRKCEKSVSPEYRDALRFTGFDLEAFETVLFSYAGTFVALILLLGIDFFLLL
SRSFDSKSLFIMGTLTFIIPLIVLYYLSEYVKIKAGLMKISSLGDIPEILSYIIMSMKLVPNLEHAVLFAARNSGRPLAT
DLKKLTWDLNLRIYSSMDDALLSFADLWGRNSEYFKRSLHLIKSSTAEPDEAQRVITLNRALDISLEGTENLMEAFAEKL
KTPSYILYSIFILIPLALVALLPAVTVVGMKPKTSDLVLLYDFIFPLLAAVYSEYILMQRPVAFAPRKIPDTHPDLADIK
QKKRTAILTGALVCALTAPLGYILLASGNPGGIVSTNPLEGYLLPALPLVIGGTAGLSIYLYFSSLPYKKIRDRIKQMEQ
EFADSLFVLGRRISEGKAPEEAFAHTARTMEGSKIGEAYEGISMNLLSMRTNLKDAVFDEEFGAFRHVYSERIRNTMLLF
TESVHKNHEAAGASIIKLADHLKELSDVEERIRRSLYDVTSTMRTTAAIFAPLIAGITLALSEVITKILNQVAERVSRVP
ADLSGMPVEISPETFSQSIPPDQFLLTIGVYIVLISAILTRFAGAIEYGGERAQLKYDLACMLPVTVVIFAVSAAASRVI
FEGLV

Sequences:

>Translated_645_residues
MEESGWYVRACKSTAKQWEWAIPNPQAFSRKCEKSVSPEYRDALRFTGFDLEAFETVLFSYAGTFVALILLLGIDFFLLL
SRSFDSKSLFIMGTLTFIIPLIVLYYLSEYVKIKAGLMKISSLGDIPEILSYIIMSMKLVPNLEHAVLFAARNSGRPLAT
DLKKLTWDLNLRIYSSMDDALLSFADLWGRNSEYFKRSLHLIKSSTAEPDEAQRVITLNRALDISLEGTENLMEAFAEKL
KTPSYILYSIFILIPLALVALLPAVTVVGMKPKTSDLVLLYDFIFPLLAAVYSEYILMQRPVAFAPRKIPDTHPDLADIK
QKKRTAILTGALVCALTAPLGYILLASGNPGGIVSTNPLEGYLLPALPLVIGGTAGLSIYLYFSSLPYKKIRDRIKQMEQ
EFADSLFVLGRRISEGKAPEEAFAHTARTMEGSKIGEAYEGISMNLLSMRTNLKDAVFDEEFGAFRHVYSERIRNTMLLF
TESVHKNHEAAGASIIKLADHLKELSDVEERIRRSLYDVTSTMRTTAAIFAPLIAGITLALSEVITKILNQVAERVSRVP
ADLSGMPVEISPETFSQSIPPDQFLLTIGVYIVLISAILTRFAGAIEYGGERAQLKYDLACMLPVTVVIFAVSAAASRVI
FEGLV
>Mature_645_residues
MEESGWYVRACKSTAKQWEWAIPNPQAFSRKCEKSVSPEYRDALRFTGFDLEAFETVLFSYAGTFVALILLLGIDFFLLL
SRSFDSKSLFIMGTLTFIIPLIVLYYLSEYVKIKAGLMKISSLGDIPEILSYIIMSMKLVPNLEHAVLFAARNSGRPLAT
DLKKLTWDLNLRIYSSMDDALLSFADLWGRNSEYFKRSLHLIKSSTAEPDEAQRVITLNRALDISLEGTENLMEAFAEKL
KTPSYILYSIFILIPLALVALLPAVTVVGMKPKTSDLVLLYDFIFPLLAAVYSEYILMQRPVAFAPRKIPDTHPDLADIK
QKKRTAILTGALVCALTAPLGYILLASGNPGGIVSTNPLEGYLLPALPLVIGGTAGLSIYLYFSSLPYKKIRDRIKQMEQ
EFADSLFVLGRRISEGKAPEEAFAHTARTMEGSKIGEAYEGISMNLLSMRTNLKDAVFDEEFGAFRHVYSERIRNTMLLF
TESVHKNHEAAGASIIKLADHLKELSDVEERIRRSLYDVTSTMRTTAAIFAPLIAGITLALSEVITKILNQVAERVSRVP
ADLSGMPVEISPETFSQSIPPDQFLLTIGVYIVLISAILTRFAGAIEYGGERAQLKYDLACMLPVTVVIFAVSAAASRVI
FEGLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71611; Mature: 71611

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEESGWYVRACKSTAKQWEWAIPNPQAFSRKCEKSVSPEYRDALRFTGFDLEAFETVLFS
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH
YAGTFVALILLLGIDFFLLLSRSFDSKSLFIMGTLTFIIPLIVLYYLSEYVKIKAGLMKI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLGDIPEILSYIIMSMKLVPNLEHAVLFAARNSGRPLATDLKKLTWDLNLRIYSSMDDA
HHCCCHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCHHHHHHHHHHEEEEEEECCHHHH
LLSFADLWGRNSEYFKRSLHLIKSSTAEPDEAQRVITLNRALDISLEGTENLMEAFAEKL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEEECCHHHHHHHHHHHH
KTPSYILYSIFILIPLALVALLPAVTVVGMKPKTSDLVLLYDFIFPLLAAVYSEYILMQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PVAFAPRKIPDTHPDLADIKQKKRTAILTGALVCALTAPLGYILLASGNPGGIVSTNPLE
CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCC
GYLLPALPLVIGGTAGLSIYLYFSSLPYKKIRDRIKQMEQEFADSLFVLGRRISEGKAPE
CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EAFAHTARTMEGSKIGEAYEGISMNLLSMRTNLKDAVFDEEFGAFRHVYSERIRNTMLLF
HHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESVHKNHEAAGASIIKLADHLKELSDVEERIRRSLYDVTSTMRTTAAIFAPLIAGITLA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEVITKILNQVAERVSRVPADLSGMPVEISPETFSQSIPPDQFLLTIGVYIVLISAILT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RFAGAIEYGGERAQLKYDLACMLPVTVVIFAVSAAASRVIFEGLV
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEESGWYVRACKSTAKQWEWAIPNPQAFSRKCEKSVSPEYRDALRFTGFDLEAFETVLFS
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH
YAGTFVALILLLGIDFFLLLSRSFDSKSLFIMGTLTFIIPLIVLYYLSEYVKIKAGLMKI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLGDIPEILSYIIMSMKLVPNLEHAVLFAARNSGRPLATDLKKLTWDLNLRIYSSMDDA
HHCCCHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCHHHHHHHHHHEEEEEEECCHHHH
LLSFADLWGRNSEYFKRSLHLIKSSTAEPDEAQRVITLNRALDISLEGTENLMEAFAEKL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEEECCHHHHHHHHHHHH
KTPSYILYSIFILIPLALVALLPAVTVVGMKPKTSDLVLLYDFIFPLLAAVYSEYILMQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PVAFAPRKIPDTHPDLADIKQKKRTAILTGALVCALTAPLGYILLASGNPGGIVSTNPLE
CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCC
GYLLPALPLVIGGTAGLSIYLYFSSLPYKKIRDRIKQMEQEFADSLFVLGRRISEGKAPE
CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EAFAHTARTMEGSKIGEAYEGISMNLLSMRTNLKDAVFDEEFGAFRHVYSERIRNTMLLF
HHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TESVHKNHEAAGASIIKLADHLKELSDVEERIRRSLYDVTSTMRTTAAIFAPLIAGITLA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEVITKILNQVAERVSRVPADLSGMPVEISPETFSQSIPPDQFLLTIGVYIVLISAILT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RFAGAIEYGGERAQLKYDLACMLPVTVVIFAVSAAASRVIFEGLV
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA