| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228384
Identifier: 21228384
GI number: 21228384
Start: 2721219
End: 2722121
Strand: Reverse
Name: 21228384
Synonym: MM_2282
Alternate gene names: NA
Gene position: 2722121-2721219 (Counterclockwise)
Preceding gene: 21228385
Following gene: 21228383
Centisome position: 66.45
GC content: 50.94
Gene sequence:
>903_bases ATGTATACATACGAGAGTGAAGGGGCAGACTTTTTCGCAAAAGCATATGCTCCAGGGCATATCACAGGTTTTTTTCAGAT CCATGAGCATAACGACCCCCACCGCAAAGGATCTACAGGCTGCGGAATTGTTCTCAACGGAGGAGTTACGACCGAAGTAA AGGTCGGGAAATCCGTGGAAAATACCGAGATATTCCTCAATGGAAAAAAAGTTGAAGGCAAAACCACCCGCACGGTTGTG GAAATGATGACAGATGAGCCTGTAAGGGTGAAAAGCTGGGCAGAAATCCCTGTAGGGTGCGGGTTCGGAGCATCCGGGGC AGGAGCTCTCGGGGCAGCTTACGCTCTTAACAGGGCACTTTCCTTGAACAGGACTGTAAACGGCCTGACAGAATACTCTC ACGTAGCTGAAGTTGTCAACCGCAGCGGACTTGGGGATGTTGCTGCCCAGTCCAGCGGCGGAGTGGTAATCAGGCTGCAT CCCGGAGGACCACAGTTTGGAAGCGTGGACAGGATTCCTGCCCCTGAAGCAAGGGTTTTCTGTATTGTACTTGGAGAGAT TTCTACGGATTCTGTTCTGGCAGACGAGACTGCTGCAGGAAAAATCAATGCCGCAGGCAAAGCTGCAATGCTCGAGCTGC TTAAAACCCCGACTCTTGAAAACTTTATGCATCAAGCGAAAAATTTTGCCAGCAGCACAGGACTTATGAGCAGCACGGCA CAGGACGTTATTGAGGCTGCATATGCAAATGGGGGGCTGGCTTCTCAGGCAATGCTCGGGGATACTGTCTTTGCAATCGC CCCTTACAGCCAGGAGTTTCCCCTTTACGAAGCCCTTCAGGAGTTTGGCCAGGTTCTGGAATACGGCATCAGCACCTGCA TACCCAGATTACTCTATGACTAA
Upstream 100 bases:
>100_bases TATGCAAACAGACCTGCGCAATATTTTACAAAACAGGAACTTCAATAAAGCAAAAATTGACTTTGAAAAATAGCTTAAAC AATAAAAAAAGGCGTTTTCT
Downstream 100 bases:
>100_bases GTTTCAGATAGAGATTCAGACCTTAACTCCTTATATATTATATATGCTGTATCCGGAATATATGCTGTATCCGGAATATA TGCTGTATCCGGACAGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVENTEIFLNGKKVEGKTTRTVV EMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRALSLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLH PGGPQFGSVDRIPAPEARVFCIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD
Sequences:
>Translated_300_residues MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVENTEIFLNGKKVEGKTTRTVV EMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRALSLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLH PGGPQFGSVDRIPAPEARVFCIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD >Mature_300_residues MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVENTEIFLNGKKVEGKTTRTVV EMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRALSLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLH PGGPQFGSVDRIPAPEARVFCIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD
Specific function: Unknown
COG id: COG1829
COG function: function code R; Predicted archaeal kinase (sugar kinase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012043 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 31676; Mature: 31676
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVE CCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCC NTEIFLNGKKVEGKTTRTVVEMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRAL CCEEEEECCEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLHPGGPQFGSVDRIPAPEARVF HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE CIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA EEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVE CCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCC NTEIFLNGKKVEGKTTRTVVEMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRAL CCEEEEECCEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLHPGGPQFGSVDRIPAPEARVF HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE CIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA EEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]