Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228384

Identifier: 21228384

GI number: 21228384

Start: 2721219

End: 2722121

Strand: Reverse

Name: 21228384

Synonym: MM_2282

Alternate gene names: NA

Gene position: 2722121-2721219 (Counterclockwise)

Preceding gene: 21228385

Following gene: 21228383

Centisome position: 66.45

GC content: 50.94

Gene sequence:

>903_bases
ATGTATACATACGAGAGTGAAGGGGCAGACTTTTTCGCAAAAGCATATGCTCCAGGGCATATCACAGGTTTTTTTCAGAT
CCATGAGCATAACGACCCCCACCGCAAAGGATCTACAGGCTGCGGAATTGTTCTCAACGGAGGAGTTACGACCGAAGTAA
AGGTCGGGAAATCCGTGGAAAATACCGAGATATTCCTCAATGGAAAAAAAGTTGAAGGCAAAACCACCCGCACGGTTGTG
GAAATGATGACAGATGAGCCTGTAAGGGTGAAAAGCTGGGCAGAAATCCCTGTAGGGTGCGGGTTCGGAGCATCCGGGGC
AGGAGCTCTCGGGGCAGCTTACGCTCTTAACAGGGCACTTTCCTTGAACAGGACTGTAAACGGCCTGACAGAATACTCTC
ACGTAGCTGAAGTTGTCAACCGCAGCGGACTTGGGGATGTTGCTGCCCAGTCCAGCGGCGGAGTGGTAATCAGGCTGCAT
CCCGGAGGACCACAGTTTGGAAGCGTGGACAGGATTCCTGCCCCTGAAGCAAGGGTTTTCTGTATTGTACTTGGAGAGAT
TTCTACGGATTCTGTTCTGGCAGACGAGACTGCTGCAGGAAAAATCAATGCCGCAGGCAAAGCTGCAATGCTCGAGCTGC
TTAAAACCCCGACTCTTGAAAACTTTATGCATCAAGCGAAAAATTTTGCCAGCAGCACAGGACTTATGAGCAGCACGGCA
CAGGACGTTATTGAGGCTGCATATGCAAATGGGGGGCTGGCTTCTCAGGCAATGCTCGGGGATACTGTCTTTGCAATCGC
CCCTTACAGCCAGGAGTTTCCCCTTTACGAAGCCCTTCAGGAGTTTGGCCAGGTTCTGGAATACGGCATCAGCACCTGCA
TACCCAGATTACTCTATGACTAA

Upstream 100 bases:

>100_bases
TATGCAAACAGACCTGCGCAATATTTTACAAAACAGGAACTTCAATAAAGCAAAAATTGACTTTGAAAAATAGCTTAAAC
AATAAAAAAAGGCGTTTTCT

Downstream 100 bases:

>100_bases
GTTTCAGATAGAGATTCAGACCTTAACTCCTTATATATTATATATGCTGTATCCGGAATATATGCTGTATCCGGAATATA
TGCTGTATCCGGACAGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVENTEIFLNGKKVEGKTTRTVV
EMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRALSLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLH
PGGPQFGSVDRIPAPEARVFCIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA
QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD

Sequences:

>Translated_300_residues
MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVENTEIFLNGKKVEGKTTRTVV
EMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRALSLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLH
PGGPQFGSVDRIPAPEARVFCIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA
QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD
>Mature_300_residues
MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVENTEIFLNGKKVEGKTTRTVV
EMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRALSLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLH
PGGPQFGSVDRIPAPEARVFCIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA
QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD

Specific function: Unknown

COG id: COG1829

COG function: function code R; Predicted archaeal kinase (sugar kinase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012043
- InterPro:   IPR006204
- InterPro:   IPR020568
- InterPro:   IPR014721 [H]

Pfam domain/function: PF00288 GHMP_kinases_N [H]

EC number: NA

Molecular weight: Translated: 31676; Mature: 31676

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVE
CCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCC
NTEIFLNGKKVEGKTTRTVVEMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRAL
CCEEEEECCEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLHPGGPQFGSVDRIPAPEARVF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
CIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA
EEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD
HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYTYESEGADFFAKAYAPGHITGFFQIHEHNDPHRKGSTGCGIVLNGGVTTEVKVGKSVE
CCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCC
NTEIFLNGKKVEGKTTRTVVEMMTDEPVRVKSWAEIPVGCGFGASGAGALGAAYALNRAL
CCEEEEECCEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SLNRTVNGLTEYSHVAEVVNRSGLGDVAAQSSGGVVIRLHPGGPQFGSVDRIPAPEARVF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
CIVLGEISTDSVLADETAAGKINAAGKAAMLELLKTPTLENFMHQAKNFASSTGLMSSTA
EEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH
QDVIEAAYANGGLASQAMLGDTVFAIAPYSQEFPLYEALQEFGQVLEYGISTCIPRLLYD
HHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]