| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228383
Identifier: 21228383
GI number: 21228383
Start: 2720047
End: 2720808
Strand: Reverse
Name: 21228383
Synonym: MM_2281
Alternate gene names: NA
Gene position: 2720808-2720047 (Counterclockwise)
Preceding gene: 21228384
Following gene: 21228382
Centisome position: 66.42
GC content: 49.34
Gene sequence:
>762_bases ATGACAGATATACCGCACGACCACCCGAGGTACGAATCCCTGCTCGCCCGTGAAAAAGTTGCAGCAGGGGTAAAAATGGG AATTACAAGTATCCAGGGACTTATTGCCCAGGGTAGAGGCGAGAGTTTTGATTACCTTATTGGTGAAAGAAGCACAGAGT CCGCCCTGTATGCAGAGAGGGCTGCAGTTGCTGCGCTTCTCCTCGCTGAGAATCCGGTAATTTCAGTAAATGGTAATGTT GCAGCCCTGGCACCTGATAAAGTAGTTACCCTTGCAGATATCACCGGAGCCAGGATTGAAGTAAACCTTTTCCACAGGAC TGACACACGGGTACATCTCATAATAGAACAGCTGAAAGCAAGCGGGGCTGCTGAGGTGCTTGGAAAGAACCCGGATGCGA GCCTTGAACTCTCACACGACAGAAGGCTTGTGAGCAGCAAAGGGATCTATACCGCAGATGTCGTGCTCGTCCCCCTGGAA GACGGAGACCGCTGCGAGAAGCTTGTAGAGATGGGAAAGACTGTGATAACAATCGACCTGAACCCTCTTTCACGGACCTC GAAAACAGCCACGATATCTATTGTTGACAACCTTACGCGAGCCCTTGGAAATATGGCAAAATTCGCGCAGGAAATGAAAA AGGAAAGGAAAGAAGAGCTTGTGAAGCTGATAACCACCTATGATAATAAAAGGACCCTTTCCGAAGCGATTTCCGAAATC CAGGAACACCTCAAGACCATGGCCGCAGAAACAGGGTACTGA
Upstream 100 bases:
>100_bases AGTACTGAACCGCATAAAATGCCCTTAGATCAGGGCAAAGCCCTTAAAATTCCAGATAGCAGGAATGAAAGTAACACAAG TATAAAGGTAAGCGACCTAC
Downstream 100 bases:
>100_bases AAGCCAATAATTATCCAGAAAAGGCAACATATGAACCTTATAGAAAAAACGAGGGAATTTGCAGCTACTTTTCATGAAGG AGAGCCCAGTTCCCACGATA
Product: hypothetical protein
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTDIPHDHPRYESLLAREKVAAGVKMGITSIQGLIAQGRGESFDYLIGERSTESALYAERAAVAALLLAENPVISVNGNV AALAPDKVVTLADITGARIEVNLFHRTDTRVHLIIEQLKASGAAEVLGKNPDASLELSHDRRLVSSKGIYTADVVLVPLE DGDRCEKLVEMGKTVITIDLNPLSRTSKTATISIVDNLTRALGNMAKFAQEMKKERKEELVKLITTYDNKRTLSEAISEI QEHLKTMAAETGY
Sequences:
>Translated_253_residues MTDIPHDHPRYESLLAREKVAAGVKMGITSIQGLIAQGRGESFDYLIGERSTESALYAERAAVAALLLAENPVISVNGNV AALAPDKVVTLADITGARIEVNLFHRTDTRVHLIIEQLKASGAAEVLGKNPDASLELSHDRRLVSSKGIYTADVVLVPLE DGDRCEKLVEMGKTVITIDLNPLSRTSKTATISIVDNLTRALGNMAKFAQEMKKERKEELVKLITTYDNKRTLSEAISEI QEHLKTMAAETGY >Mature_252_residues TDIPHDHPRYESLLAREKVAAGVKMGITSIQGLIAQGRGESFDYLIGERSTESALYAERAAVAALLLAENPVISVNGNVA ALAPDKVVTLADITGARIEVNLFHRTDTRVHLIIEQLKASGAAEVLGKNPDASLELSHDRRLVSSKGIYTADVVLVPLED GDRCEKLVEMGKTVITIDLNPLSRTSKTATISIVDNLTRALGNMAKFAQEMKKERKEELVKLITTYDNKRTLSEAISEIQ EHLKTMAAETGY
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent and ADP-producing reaction
COG id: COG1701
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal pantothenate synthetase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PASYA_METMA (Q8PUQ1)
Other databases:
- EMBL: AE008384 - RefSeq: NP_634305.1 - GeneID: 1480623 - GenomeReviews: AE008384_GR - KEGG: mma:MM_2281 - NMPDR: fig|192952.1.peg.2281 - HOGENOM: HBG297347 - OMA: GEAFDYL - ProtClustDB: PRK13761 - BioCyc: MMAZ192952:MM2281-MONOMER - InterPro: IPR002855 - PIRSF: PIRSF004853 - ProDom: PD016827
Pfam domain/function: PF02006 DUF137
EC number: NA
Molecular weight: Translated: 27594; Mature: 27463
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIPHDHPRYESLLAREKVAAGVKMGITSIQGLIAQGRGESFDYLIGERSTESALYAER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHH AAVAALLLAENPVISVNGNVAALAPDKVVTLADITGARIEVNLFHRTDTRVHLIIEQLKA HHHHHHHHCCCCEEEECCCEEEECCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHC SGAAEVLGKNPDASLELSHDRRLVSSKGIYTADVVLVPLEDGDRCEKLVEMGKTVITIDL CCHHHHHCCCCCCCEEECCCHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEEC NPLSRTSKTATISIVDNLTRALGNMAKFAQEMKKERKEELVKLITTYDNKRTLSEAISEI CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QEHLKTMAAETGY HHHHHHHHHCCCC >Mature Secondary Structure TDIPHDHPRYESLLAREKVAAGVKMGITSIQGLIAQGRGESFDYLIGERSTESALYAER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHH AAVAALLLAENPVISVNGNVAALAPDKVVTLADITGARIEVNLFHRTDTRVHLIIEQLKA HHHHHHHHCCCCEEEECCCEEEECCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHC SGAAEVLGKNPDASLELSHDRRLVSSKGIYTADVVLVPLEDGDRCEKLVEMGKTVITIDL CCHHHHHCCCCCCCEEECCCHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEEC NPLSRTSKTATISIVDNLTRALGNMAKFAQEMKKERKEELVKLITTYDNKRTLSEAISEI CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QEHLKTMAAETGY HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824