Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is ybfF [C]

Identifier: 21228325

GI number: 21228325

Start: 2649351

End: 2650496

Strand: Reverse

Name: ybfF [C]

Synonym: MM_2223

Alternate gene names: 21228325

Gene position: 2650496-2649351 (Counterclockwise)

Preceding gene: 21228329

Following gene: 21228324

Centisome position: 64.7

GC content: 45.81

Gene sequence:

>1146_bases
ATGATGTATAAGCTGGGCATGCCCTCTCTTTCTATCGTAATGCCTTCCATGAATGAGGAAGAAACTATTCGTATCTGTAT
AGAGAAAGCCCAGTATATATTCAAAAAATATGGTATAGAGGGGGAAATAATAGTTGCTGATAATTCTTCTGACAGAACTG
CAGAGATTGCAGCATCAATGGGTGCAAAAGTCATAGGCCCAATAAAAGGTTACGGGAATGCTTACCTCAAAGGGCTCGCA
GAGGCAAAAGGGGACTACATTGCTATCGCAGATGCAGACAACACCTATGACCTCCTTGAACTTGACAGGTTTCTGGATCC
CCTTATGTCAGGAGAAGCAGATTTCATAATGGGCACGCGGCTTAAGGGAGAAATTAAAGCAGGAGCCATGCCCTGGCTGC
ACCAGTACATAGGCAATCCCATACTGACAGGAATGCTTAATTTCCTGTTCAAAACGAAAATCTCGGACGCACACTGCGGG
ATGAGGGCTTTTACTAAAGAAGCCCTTGAGAAAATGGATCTTAAAACTCACGGCATGGAACTCGCATCTGAGATGGTGAT
CGAAGCTGCAAGATGCGGGCTCCGAATTAAGGAAGTTCCCATAACATATTATTCACGCAAAGCTCCCTCCAAACTTCGCT
CATTTCAGGACGGCTGGCGGCATGTAAGATTTATGATGTTATACAGGCCTGTCCCTTTCCTCTATATCCCAGGAGCTTTC
GTATTTCTCCTGGGTTTCCTTATAACCGCTTCCCTTCTTCTTACGAACAACGCTGCATATAACCGTCTGCATTCCTTTAT
CTTGGGCAGCATGCTCTTAATTATTGGCGGGCAGATCCTTGCAACCGGCGGGTACATGAAAACATACGGAATTATCCACG
GCATGTACCGCGATGACGAAAAAGGTAGAAAGCTTCTGAGCTACCATTCCCTTGAAAAAGAGCTTGTAGGAGGATCCCTT
ATCCTGGGCTCAGGATGTATTATCGGACTGAAAGTTGCCTATACCTGGGCCAGTACAGGCTATGGCACCCTTGAAGAGGT
GGAGTCTGCGGTAATCTCAATGGTCCTTGCAGCAATCGGGCTTCAGCTGATTTTTGCTGCGATATTTGTAAGTGTAATGC
TCCTTGAAGTTGACACCGACTGGTAA

Upstream 100 bases:

>100_bases
CTGATACTTTATATAGCTTGTTAGCAGAAGTCACGCCCTTTTCCCGGGCTTATTTTATACTGCTTATCTTTCTGAAGTAT
CAAAATAGTTATTAAGAAAT

Downstream 100 bases:

>100_bases
AGTGATCAGATGAAAGTTGCCTTTGTATACGATGCTGTCTATCCCTGGGTCAAGGGCGGCGCTGAGGTGCGCATCCATGA
GCTGGGGAGGAGGCTTTCCT

Product: dolichyl-phosphate glucose synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MMYKLGMPSLSIVMPSMNEEETIRICIEKAQYIFKKYGIEGEIIVADNSSDRTAEIAASMGAKVIGPIKGYGNAYLKGLA
EAKGDYIAIADADNTYDLLELDRFLDPLMSGEADFIMGTRLKGEIKAGAMPWLHQYIGNPILTGMLNFLFKTKISDAHCG
MRAFTKEALEKMDLKTHGMELASEMVIEAARCGLRIKEVPITYYSRKAPSKLRSFQDGWRHVRFMMLYRPVPFLYIPGAF
VFLLGFLITASLLLTNNAAYNRLHSFILGSMLLIIGGQILATGGYMKTYGIIHGMYRDDEKGRKLLSYHSLEKELVGGSL
ILGSGCIIGLKVAYTWASTGYGTLEEVESAVISMVLAAIGLQLIFAAIFVSVMLLEVDTDW

Sequences:

>Translated_381_residues
MMYKLGMPSLSIVMPSMNEEETIRICIEKAQYIFKKYGIEGEIIVADNSSDRTAEIAASMGAKVIGPIKGYGNAYLKGLA
EAKGDYIAIADADNTYDLLELDRFLDPLMSGEADFIMGTRLKGEIKAGAMPWLHQYIGNPILTGMLNFLFKTKISDAHCG
MRAFTKEALEKMDLKTHGMELASEMVIEAARCGLRIKEVPITYYSRKAPSKLRSFQDGWRHVRFMMLYRPVPFLYIPGAF
VFLLGFLITASLLLTNNAAYNRLHSFILGSMLLIIGGQILATGGYMKTYGIIHGMYRDDEKGRKLLSYHSLEKELVGGSL
ILGSGCIIGLKVAYTWASTGYGTLEEVESAVISMVLAAIGLQLIFAAIFVSVMLLEVDTDW
>Mature_381_residues
MMYKLGMPSLSIVMPSMNEEETIRICIEKAQYIFKKYGIEGEIIVADNSSDRTAEIAASMGAKVIGPIKGYGNAYLKGLA
EAKGDYIAIADADNTYDLLELDRFLDPLMSGEADFIMGTRLKGEIKAGAMPWLHQYIGNPILTGMLNFLFKTKISDAHCG
MRAFTKEALEKMDLKTHGMELASEMVIEAARCGLRIKEVPITYYSRKAPSKLRSFQDGWRHVRFMMLYRPVPFLYIPGAF
VFLLGFLITASLLLTNNAAYNRLHSFILGSMLLIIGGQILATGGYMKTYGIIHGMYRDDEKGRKLLSYHSLEKELVGGSL
ILGSGCIIGLKVAYTWASTGYGTLEEVESAVISMVLAAIGLQLIFAAIFVSVMLLEVDTDW

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=210, Percent_Identity=30, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71999402, Length=212, Percent_Identity=27.3584905660377, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585265, Length=213, Percent_Identity=30.9859154929577, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 42167; Mature: 42167

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMYKLGMPSLSIVMPSMNEEETIRICIEKAQYIFKKYGIEGEIIVADNSSDRTAEIAASM
CEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHC
GAKVIGPIKGYGNAYLKGLAEAKGDYIAIADADNTYDLLELDRFLDPLMSGEADFIMGTR
CCCEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECC
LKGEIKAGAMPWLHQYIGNPILTGMLNFLFKTKISDAHCGMRAFTKEALEKMDLKTHGME
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCHHHHHHH
LASEMVIEAARCGLRIKEVPITYYSRKAPSKLRSFQDGWRHVRFMMLYRPVPFLYIPGAF
HHHHHHHHHHHCCCEEEECCEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH
VFLLGFLITASLLLTNNAAYNRLHSFILGSMLLIIGGQILATGGYMKTYGIIHGMYRDDE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHCCCCH
KGRKLLSYHSLEKELVGGSLILGSGCIIGLKVAYTWASTGYGTLEEVESAVISMVLAAIG
HHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
LQLIFAAIFVSVMLLEVDTDW
HHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MMYKLGMPSLSIVMPSMNEEETIRICIEKAQYIFKKYGIEGEIIVADNSSDRTAEIAASM
CEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHC
GAKVIGPIKGYGNAYLKGLAEAKGDYIAIADADNTYDLLELDRFLDPLMSGEADFIMGTR
CCCEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECC
LKGEIKAGAMPWLHQYIGNPILTGMLNFLFKTKISDAHCGMRAFTKEALEKMDLKTHGME
CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHCHHHHHHH
LASEMVIEAARCGLRIKEVPITYYSRKAPSKLRSFQDGWRHVRFMMLYRPVPFLYIPGAF
HHHHHHHHHHHCCCEEEECCEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHH
VFLLGFLITASLLLTNNAAYNRLHSFILGSMLLIIGGQILATGGYMKTYGIIHGMYRDDE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHCCCCH
KGRKLLSYHSLEKELVGGSLILGSGCIIGLKVAYTWASTGYGTLEEVESAVISMVLAAIG
HHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
LQLIFAAIFVSVMLLEVDTDW
HHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]