| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mshA [H]
Identifier: 21228324
GI number: 21228324
Start: 2648169
End: 2649341
Strand: Reverse
Name: mshA [H]
Synonym: MM_2222
Alternate gene names: 21228324
Gene position: 2649341-2648169 (Counterclockwise)
Preceding gene: 21228325
Following gene: 21228323
Centisome position: 64.68
GC content: 43.9
Gene sequence:
>1173_bases ATGAAAGTTGCCTTTGTATACGATGCTGTCTATCCCTGGGTCAAGGGCGGCGCTGAGGTGCGCATCCATGAGCTGGGGAG GAGGCTTTCCTTACAGGGACATGATGTGCACCTTTTCGGGATTAAATGGTGGGAGGGTGAAGATGTTTTACAGTATGAAG GCATGACCCTTCACGGAGTCTGTAAAGCCCGTGACCTGTATGTAAACGGCAAGCGTTCGATTTCCGAAGCACTCATTTTC TCTTTAAAGCTGTTTCCGGTTCTTGTAAGAGAAAAGTTCGACCTTATTGACGTGAGTGTATTTCCCTATTTTTCCTGTTT CACCGTAAAAGCGGTTTCAGTCCTGAAGAGCACCCCTGCAGTATTTACATGGCACGAGGTATGGGGGGACTACTGGTACG AATACCTTGGAAAAAGAAAAGGCTTTTTCGGGCTTGCGATAGAGGCTGCGGTTGCCAAGATTTCAAAGAATGATATTGCG GTCTCGGAGTGGACAAAGAACAGACTTGAGTCGGTTCTGGGAACGAAGAGAGAGATAGCAGTCCTGCCCAACGGGGTCGA CCAGAAGCTGATCTCCGGGATCAAGCCTGCAGGGCAGGATTGTTCAGAAAAACAAAAGGGCAAAATTTATGACATTATCT TTGCAGGCAGGCTCATAAAAGAAAAAAATGTTGATGTTTTGATAAAAACTGTTTCCCTGTTAAAAAAAGATAACCCTGAA GTTTGCTGCTGTATTGCCGGAGATGGGCCTGAAAGAAAAGCTCTTGAGAAATTTACTCTTGAGATTGGGATGCAGAAAAA TGTAGAATTTGCAGGGTTTCAGGAGTACAGGGCATTAATAGGAAAAATCAAAGCCTCAAAGGTTCTTGTTCTTCCTTCAA GCAGGGAAGGCTTTGGAATGGTTGTAATCGAGGCTTTTGCCTGTGGTGTGCCCGTAGTAACAGTAAAAGAAAAGTATAAC GCAGCACAGGGGCTTATTGCAGACGGGATTGATGGGTTCGTCGTGGGGCTTGACGAGAGAGAAATTGCAAAGGCTATAGA CAAAATAATAAAAGAGCATCAGGAAGGCATAAAGTATTCAGAAGCTATATTAAACAAAGCTAAAAAATATGATTGGGACG AAATCGTTAAGAATGTCCTTATCGCCTACAGAGGCTTTATAAAAAAGGATTAA
Upstream 100 bases:
>100_bases CTCAATGGTCCTTGCAGCAATCGGGCTTCAGCTGATTTTTGCTGCGATATTTGTAAGTGTAATGCTCCTTGAAGTTGACA CCGACTGGTAAAGTGATCAG
Downstream 100 bases:
>100_bases AGTTAAGTATTCCTACCTGTATAAAAAATAAAACCTACCTGAAATCTCTTAATAAAAACAACCCGATTCAAAGAAAATAT AATAAATAATTACCTTCTTT
Product: galactosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKVAFVYDAVYPWVKGGAEVRIHELGRRLSLQGHDVHLFGIKWWEGEDVLQYEGMTLHGVCKARDLYVNGKRSISEALIF SLKLFPVLVREKFDLIDVSVFPYFSCFTVKAVSVLKSTPAVFTWHEVWGDYWYEYLGKRKGFFGLAIEAAVAKISKNDIA VSEWTKNRLESVLGTKREIAVLPNGVDQKLISGIKPAGQDCSEKQKGKIYDIIFAGRLIKEKNVDVLIKTVSLLKKDNPE VCCCIAGDGPERKALEKFTLEIGMQKNVEFAGFQEYRALIGKIKASKVLVLPSSREGFGMVVIEAFACGVPVVTVKEKYN AAQGLIADGIDGFVVGLDEREIAKAIDKIIKEHQEGIKYSEAILNKAKKYDWDEIVKNVLIAYRGFIKKD
Sequences:
>Translated_390_residues MKVAFVYDAVYPWVKGGAEVRIHELGRRLSLQGHDVHLFGIKWWEGEDVLQYEGMTLHGVCKARDLYVNGKRSISEALIF SLKLFPVLVREKFDLIDVSVFPYFSCFTVKAVSVLKSTPAVFTWHEVWGDYWYEYLGKRKGFFGLAIEAAVAKISKNDIA VSEWTKNRLESVLGTKREIAVLPNGVDQKLISGIKPAGQDCSEKQKGKIYDIIFAGRLIKEKNVDVLIKTVSLLKKDNPE VCCCIAGDGPERKALEKFTLEIGMQKNVEFAGFQEYRALIGKIKASKVLVLPSSREGFGMVVIEAFACGVPVVTVKEKYN AAQGLIADGIDGFVVGLDEREIAKAIDKIIKEHQEGIKYSEAILNKAKKYDWDEIVKNVLIAYRGFIKKD >Mature_390_residues MKVAFVYDAVYPWVKGGAEVRIHELGRRLSLQGHDVHLFGIKWWEGEDVLQYEGMTLHGVCKARDLYVNGKRSISEALIF SLKLFPVLVREKFDLIDVSVFPYFSCFTVKAVSVLKSTPAVFTWHEVWGDYWYEYLGKRKGFFGLAIEAAVAKISKNDIA VSEWTKNRLESVLGTKREIAVLPNGVDQKLISGIKPAGQDCSEKQKGKIYDIIFAGRLIKEKNVDVLIKTVSLLKKDNPE VCCCIAGDGPERKALEKFTLEIGMQKNVEFAGFQEYRALIGKIKASKVLVLPSSREGFGMVVIEAFACGVPVVTVKEKYN AAQGLIADGIDGFVVGLDEREIAKAIDKIIKEHQEGIKYSEAILNKAKKYDWDEIVKNVLIAYRGFIKKD
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Drosophila melanogaster, GI24654571, Length=327, Percent_Identity=25.0764525993884, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 43768; Mature: 43768
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAFVYDAVYPWVKGGAEVRIHELGRRLSLQGHDVHLFGIKWWEGEDVLQYEGMTLHGV CEEEEEEHHHHHHHCCCCEEEHHHHCCCCCCCCCEEEEEEEEEECCCCEEEECCEEEEEE CKARDLYVNGKRSISEALIFSLKLFPVLVREKFDLIDVSVFPYFSCFTVKAVSVLKSTPA ECEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC VFTWHEVWGDYWYEYLGKRKGFFGLAIEAAVAKISKNDIAVSEWTKNRLESVLGTKREIA EEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE VLPNGVDQKLISGIKPAGQDCSEKQKGKIYDIIFAGRLIKEKNVDVLIKTVSLLKKDNPE ECCCCCHHHHHHCCCCCCCCCCHHHCCCEEEEEEECHHHCCCCHHHHHHHHHHHHCCCCC VCCCIAGDGPERKALEKFTLEIGMQKNVEFAGFQEYRALIGKIKASKVLVLPSSREGFGM EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEE VVIEAFACGVPVVTVKEKYNAAQGLIADGIDGFVVGLDEREIAKAIDKIIKEHQEGIKYS EEEEHHHCCCCEEEEHHHHCHHCCHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHH EAILNKAKKYDWDEIVKNVLIAYRGFIKKD HHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVAFVYDAVYPWVKGGAEVRIHELGRRLSLQGHDVHLFGIKWWEGEDVLQYEGMTLHGV CEEEEEEHHHHHHHCCCCEEEHHHHCCCCCCCCCEEEEEEEEEECCCCEEEECCEEEEEE CKARDLYVNGKRSISEALIFSLKLFPVLVREKFDLIDVSVFPYFSCFTVKAVSVLKSTPA ECEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC VFTWHEVWGDYWYEYLGKRKGFFGLAIEAAVAKISKNDIAVSEWTKNRLESVLGTKREIA EEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE VLPNGVDQKLISGIKPAGQDCSEKQKGKIYDIIFAGRLIKEKNVDVLIKTVSLLKKDNPE ECCCCCHHHHHHCCCCCCCCCCHHHCCCEEEEEEECHHHCCCCHHHHHHHHHHHHCCCCC VCCCIAGDGPERKALEKFTLEIGMQKNVEFAGFQEYRALIGKIKASKVLVLPSSREGFGM EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEE VVIEAFACGVPVVTVKEKYNAAQGLIADGIDGFVVGLDEREIAKAIDKIIKEHQEGIKYS EEEEHHHCCCCEEEEHHHHCHHCCHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHH EAILNKAKKYDWDEIVKNVLIAYRGFIKKD HHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA