| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is spsI [H]
Identifier: 21228318
GI number: 21228318
Start: 2640482
End: 2641228
Strand: Reverse
Name: spsI [H]
Synonym: MM_2216
Alternate gene names: 21228318
Gene position: 2641228-2640482 (Counterclockwise)
Preceding gene: 21228320
Following gene: 21228317
Centisome position: 64.48
GC content: 41.23
Gene sequence:
>747_bases TTGAGAAAAAGTATAAAAAAAGGAGTAATATCTATGAAAGGTGTAATCCTCGCAGGAGGCACAGGCTCTCGCCTCTATCC GCTTACTAAAGTAACAAACAAGCACCTGCTACCAGTATACGATAAGCCGATGATTTACTATCCCATACAGACTCTTATTA ATGCAGGAATCAAAGAGATTATGATCGTTTCAGGAAAAGGTCATGCCGGACACTTTCTGGAATTGCTAGGCTCAGGTTCC GAATTAGGTGTCCGTCTAACCTATGAAATCCAGGAGGAGGCCGGAGGAATTGCTCAGGCACTTGGACTTGCGGAAGACTT TGCTGACAATAGTCCAGTGACAATGATTCTTGGAGATAATATTTTTCAGGATAATATCATTGATTCCGTAAAGTCTTTCA CATCAGGAGCAAAGATATTTCTCAAAGAGGTTTCCGATGCTCACAGATTTGGAGTCGCTGAAATTGATGGAAACCGGATA ATTTCTATAGAAGAAAAGCCTAAAATCCCGAAATCCAGCCTTGCAGTTACGGGCCTGTACATCTATGACTCCAGAGTCTT TGAGATAATACGCAACCTGAAACCCTCCGGAAGAGGGGAGCTTGAGATTACCGATGTCAATAACGCATATGTTAGGATGG GTGAAATGGAATACTCAATACTTGAAGGATTCTGGAGTGACGCGGGTACTTTTGAATCTTTATTCCGGGCAAGTGAGCTT GTAAAAAACTTAAATAATAAAAACTAA
Upstream 100 bases:
>100_bases AGGAACAGTAAAATGCCCTGGGGTTCTGAGTATTCTATCCTGACAAATGCAAAATTATCCCTCCAGACCATGAAAAGGAA CCCATATTAAATATCCTGAA
Downstream 100 bases:
>100_bases CGGAAAAACGAATATGTATATTTTTGAATACAGCGAGTTAATCCGAAATCTGGTAATAAGCGACCTCAAGGTCAAATACC AGAGTTCTTTCTTAGGTTTT
Product: glucose-1-phosphate thymidylyltransferase
Products: diphosphate; dTDPglucose
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRKSIKKGVISMKGVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPIQTLINAGIKEIMIVSGKGHAGHFLELLGSGS ELGVRLTYEIQEEAGGIAQALGLAEDFADNSPVTMILGDNIFQDNIIDSVKSFTSGAKIFLKEVSDAHRFGVAEIDGNRI ISIEEKPKIPKSSLAVTGLYIYDSRVFEIIRNLKPSGRGELEITDVNNAYVRMGEMEYSILEGFWSDAGTFESLFRASEL VKNLNNKN
Sequences:
>Translated_248_residues MRKSIKKGVISMKGVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPIQTLINAGIKEIMIVSGKGHAGHFLELLGSGS ELGVRLTYEIQEEAGGIAQALGLAEDFADNSPVTMILGDNIFQDNIIDSVKSFTSGAKIFLKEVSDAHRFGVAEIDGNRI ISIEEKPKIPKSSLAVTGLYIYDSRVFEIIRNLKPSGRGELEITDVNNAYVRMGEMEYSILEGFWSDAGTFESLFRASEL VKNLNNKN >Mature_248_residues MRKSIKKGVISMKGVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPIQTLINAGIKEIMIVSGKGHAGHFLELLGSGS ELGVRLTYEIQEEAGGIAQALGLAEDFADNSPVTMILGDNIFQDNIIDSVKSFTSGAKIFLKEVSDAHRFGVAEIDGNRI ISIEEKPKIPKSSLAVTGLYIYDSRVFEIIRNLKPSGRGELEITDVNNAYVRMGEMEYSILEGFWSDAGTFESLFRASEL VKNLNNKN
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=225, Percent_Identity=28.4444444444444, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI11761619, Length=225, Percent_Identity=28.4444444444444, Blast_Score=80, Evalue=1e-15, Organism=Escherichia coli, GI1790224, Length=244, Percent_Identity=48.7704918032787, Blast_Score=229, Evalue=1e-61, Organism=Escherichia coli, GI1788351, Length=243, Percent_Identity=45.679012345679, Blast_Score=221, Evalue=3e-59, Organism=Escherichia coli, GI1787488, Length=258, Percent_Identity=25.968992248062, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788355, Length=262, Percent_Identity=22.9007633587786, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI133931050, Length=244, Percent_Identity=27.0491803278689, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320148, Length=240, Percent_Identity=31.6666666666667, Blast_Score=86, Evalue=6e-18, Organism=Drosophila melanogaster, GI21355443, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24644084, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: 2.7.7.24
Molecular weight: Translated: 27250; Mature: 27250
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSIKKGVISMKGVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPIQTLINAGIKEI CCCCHHHCHHEECCEEEECCCCCCEEEEHHHCCCCCCEECCCCEEEECHHHHHHCCCCEE MIVSGKGHAGHFLELLGSGSELGVRLTYEIQEEAGGIAQALGLAEDFADNSPVTMILGDN EEECCCCCCHHHHHHHCCCCCCEEEEEEEECHHCCHHHHHHHHHHHHCCCCCEEEEECCC IFQDNIIDSVKSFTSGAKIFLKEVSDAHRFGVAEIDGNRIISIEEKPKIPKSSLAVTGLY CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCEEEEEEE IYDSRVFEIIRNLKPSGRGELEITDVNNAYVRMGEMEYSILEGFWSDAGTFESLFRASEL EEHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH VKNLNNKN HHHCCCCC >Mature Secondary Structure MRKSIKKGVISMKGVILAGGTGSRLYPLTKVTNKHLLPVYDKPMIYYPIQTLINAGIKEI CCCCHHHCHHEECCEEEECCCCCCEEEEHHHCCCCCCEECCCCEEEECHHHHHHCCCCEE MIVSGKGHAGHFLELLGSGSELGVRLTYEIQEEAGGIAQALGLAEDFADNSPVTMILGDN EEECCCCCCHHHHHHHCCCCCCEEEEEEEECHHCCHHHHHHHHHHHHCCCCCEEEEECCC IFQDNIIDSVKSFTSGAKIFLKEVSDAHRFGVAEIDGNRIISIEEKPKIPKSSLAVTGLY CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCEEEEEEE IYDSRVFEIIRNLKPSGRGELEITDVNNAYVRMGEMEYSILEGFWSDAGTFESLFRASEL EEHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH VKNLNNKN HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dTTP; alpha-D-glucose 1-phosphate
Specific reaction: dTTP + alpha-D-glucose 1-phosphate = diphosphate + dTDP-glucose
General reaction: Nucleotidyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]