| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228301
Identifier: 21228301
GI number: 21228301
Start: 2612756
End: 2613910
Strand: Direct
Name: 21228301
Synonym: MM_2199
Alternate gene names: NA
Gene position: 2612756-2613910 (Clockwise)
Preceding gene: 21228300
Following gene: 21228302
Centisome position: 63.78
GC content: 39.65
Gene sequence:
>1155_bases GTGACGGGGGAATGGAAGGAATGTAAGCTGAGGGAAATAGCGTCAGAAATAAAATCCGGTGGTACACCATCAACAAAGCA TCAAGAATATTATGGAGGAATTATCCCTTGGCTCAACACAAAAGAAATTCACTTCAATAGAATTCGCGATACGGACATAA AAATTACAGAAGGTGGGTTAAACAACTCCTCTGCAAAATGGGTTAAAGAAAATTCTATTATTGTTGCCATGTATGGTGCA ACTGCTGGAAAAATAGCTATAAATAAAATTCCCTTAACTACAAATCAGGCGTGTTGCAATATTACGCCCGATAGCGAAAA AGCAGACTATAACTTCGTATATTATAATTTATGTCATAGATACGATGAATTGGTAAATCTGAGTTGTGGTGCTGCTCAAC AAAATCTAAATGTTGGGTTAATTACCAATCTTGATATTATTCTTCCCCCTATCACCGAACAATGCGCTATCGCCTCCGTT CTTTCCAGCCTCGACGACAAGATAGACCTGCTCCACCGCCAGAACAAGACCCTTGAAGCTATGGCAGAAACGCTGTTCAG GCAGTGGTTTGTGGAGGAGGCGGATGAGGATTGGGAGGAAGGTTTTCTTCCTGATGAATTTGATTTCACTATGGGTCAAT CCCCTCCGGGCACTTCTTACAATCAAGAAGGTGTTGGGAAGCCAATGTTTCAAGGAAATGCTGATTTTGGTTTCAGATTT CCAGAAGAGAGAGTTTATACTACCGAACCTACACGATTAGCATATCCGCATGATACTTTGATAAGTGTTAGAGCTCCTGT GGGGGCACAAAACATGGCAAAAGTAGAGTGTTGTATTGGGCGTGGAGTTTCTGCTTTTCGCTATAAAGCTAACAATGATT TTTACACATATACATATTTTAAGTTACGTTCATTGATGGATGAAATTAAAAAGTTCAATGATGAAGGGACTGTATTTGGT TCGATTAGTAAAACAGACTTCCTGCAAATGGGAATTGCAATTCCTCCTGAAGACATAATAGAAAAGTTTGAAATCCATGC AAAGCCGCTTAATGATAAAGTAATTGAGAATTGCATTCAAATAAAATTACTTGAGGTTATGAGAGATACGCTGCTGCCTA AATTGATGAGTGGGGAAGTGAGGGTGGAGGGATGA
Upstream 100 bases:
>100_bases ATTTCGGCGCTTCCCTGAAATACCTCGATAAGAAATGGTTCGCCTTCTCAAAAATGGATATAGGAGCAATTGAGATACTC ACAAGGCTGGAGGGGATGAA
Downstream 100 bases:
>100_bases GTAAACACACCGAAAGTATTCATATTTTGGATAAAGTAGGATTATACGTAACTTCGTTGTGGCTTCTATTTTTCCTGTTA ATAGTACTAACAATTGATGT
Product: type I restriction-modification system specificity subunit
Products: NA
Alternate protein names: S.MjaXIP; Type I restriction enzyme MjaXIP specificity protein; S protein [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTGEWKECKLREIASEIKSGGTPSTKHQEYYGGIIPWLNTKEIHFNRIRDTDIKITEGGLNNSSAKWVKENSIIVAMYGA TAGKIAINKIPLTTNQACCNITPDSEKADYNFVYYNLCHRYDELVNLSCGAAQQNLNVGLITNLDIILPPITEQCAIASV LSSLDDKIDLLHRQNKTLEAMAETLFRQWFVEEADEDWEEGFLPDEFDFTMGQSPPGTSYNQEGVGKPMFQGNADFGFRF PEERVYTTEPTRLAYPHDTLISVRAPVGAQNMAKVECCIGRGVSAFRYKANNDFYTYTYFKLRSLMDEIKKFNDEGTVFG SISKTDFLQMGIAIPPEDIIEKFEIHAKPLNDKVIENCIQIKLLEVMRDTLLPKLMSGEVRVEG
Sequences:
>Translated_384_residues MTGEWKECKLREIASEIKSGGTPSTKHQEYYGGIIPWLNTKEIHFNRIRDTDIKITEGGLNNSSAKWVKENSIIVAMYGA TAGKIAINKIPLTTNQACCNITPDSEKADYNFVYYNLCHRYDELVNLSCGAAQQNLNVGLITNLDIILPPITEQCAIASV LSSLDDKIDLLHRQNKTLEAMAETLFRQWFVEEADEDWEEGFLPDEFDFTMGQSPPGTSYNQEGVGKPMFQGNADFGFRF PEERVYTTEPTRLAYPHDTLISVRAPVGAQNMAKVECCIGRGVSAFRYKANNDFYTYTYFKLRSLMDEIKKFNDEGTVFG SISKTDFLQMGIAIPPEDIIEKFEIHAKPLNDKVIENCIQIKLLEVMRDTLLPKLMSGEVRVEG >Mature_383_residues TGEWKECKLREIASEIKSGGTPSTKHQEYYGGIIPWLNTKEIHFNRIRDTDIKITEGGLNNSSAKWVKENSIIVAMYGAT AGKIAINKIPLTTNQACCNITPDSEKADYNFVYYNLCHRYDELVNLSCGAAQQNLNVGLITNLDIILPPITEQCAIASVL SSLDDKIDLLHRQNKTLEAMAETLFRQWFVEEADEDWEEGFLPDEFDFTMGQSPPGTSYNQEGVGKPMFQGNADFGFRFP EERVYTTEPTRLAYPHDTLISVRAPVGAQNMAKVECCIGRGVSAFRYKANNDFYTYTYFKLRSLMDEIKKFNDEGTVFGS ISKTDFLQMGIAIPPEDIIEKFEIHAKPLNDKVIENCIQIKLLEVMRDTLLPKLMSGEVRVEG
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 43383; Mature: 43252
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGEWKECKLREIASEIKSGGTPSTKHQEYYGGIIPWLNTKEIHFNRIRDTDIKITEGGL CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCC NNSSAKWVKENSIIVAMYGATAGKIAINKIPLTTNQACCNITPDSEKADYNFVYYNLCHR CCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEEHHHHHH YDELVNLSCGAAQQNLNVGLITNLDIILPPITEQCAIASVLSSLDDKIDLLHRQNKTLEA HHHHHCCCCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH MAETLFRQWFVEEADEDWEEGFLPDEFDFTMGQSPPGTSYNQEGVGKPMFQGNADFGFRF HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEERVYTTEPTRLAYPHDTLISVRAPVGAQNMAKVECCIGRGVSAFRYKANNDFYTYTYF CCCCEEECCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEHHH KLRSLMDEIKKFNDEGTVFGSISKTDFLQMGIAIPPEDIIEKFEIHAKPLNDKVIENCIQ HHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH IKLLEVMRDTLLPKLMSGEVRVEG HHHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure TGEWKECKLREIASEIKSGGTPSTKHQEYYGGIIPWLNTKEIHFNRIRDTDIKITEGGL CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCC NNSSAKWVKENSIIVAMYGATAGKIAINKIPLTTNQACCNITPDSEKADYNFVYYNLCHR CCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEEHHHHHH YDELVNLSCGAAQQNLNVGLITNLDIILPPITEQCAIASVLSSLDDKIDLLHRQNKTLEA HHHHHCCCCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH MAETLFRQWFVEEADEDWEEGFLPDEFDFTMGQSPPGTSYNQEGVGKPMFQGNADFGFRF HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEERVYTTEPTRLAYPHDTLISVRAPVGAQNMAKVECCIGRGVSAFRYKANNDFYTYTYF CCCCEEECCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEHHH KLRSLMDEIKKFNDEGTVFGSISKTDFLQMGIAIPPEDIIEKFEIHAKPLNDKVIENCIQ HHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH IKLLEVMRDTLLPKLMSGEVRVEG HHHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]