| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228292
Identifier: 21228292
GI number: 21228292
Start: 2598268
End: 2599098
Strand: Reverse
Name: 21228292
Synonym: MM_2190
Alternate gene names: NA
Gene position: 2599098-2598268 (Counterclockwise)
Preceding gene: 21228297
Following gene: 21228291
Centisome position: 63.45
GC content: 39.23
Gene sequence:
>831_bases ATGATTCCTAAATACAGGTACAAACCCGGAGTCTATTTTACTGCGACTTTTATTATAACCTATACTCTCTGGTTTGCAGG GGCATATTTAAGTTTTCAGGATGATAGCGGGCTGTATATGTTATTAATGATACCTGGGCTGATGGCGCCTTTTCTTGTTT CACTATTTATGATATCTACATCCAAAAATTCGGATTTAAAAAAGGATTTTATTAACCGTCTTATCAATCTCAGGTTAATA AGGCCAAAAGTGCTGCTGGCATTTTTTATAATAATGCCACTCACTGTTCTGGTATCTATCTTTCTTTCTCTTCCATTTGG TGGATCGACTTCTCAATTCCAATTTGCTGAAGGTTACTCATTTTCATCAGGGTTTGTCCCTGCGTTTCTTACTCTTCTCC TGGCTGCAACTTTTGAAGAGCTTGGATGGAGAGGATACGCCTTTGACAGTCTGCAAAGCAGATACACTTTCTTTATGGCA TCTCTTATTTTCGGCATACTCTGGTCACTCTGGCACTTCCCACTTATCTTTGTCAAGGACATGTATCAGTATGAGATTTT CCACGAAAACATCTGGTATGCAGTGAATTTTTTTGTCGGCGTCATCCCTATGGGAGTGATTATCAGCTGGATCTGTATAA AAAACGGAAAAAGTGTTCTGGCAGCAATTCTCATTCACGTTTCCATCAATTTCTTGCAGGAAGCTCTGCAAATGACCCAA TTTGCAAAGTGCATTGAAACTGTGGTTATTACTGCCGTCGCTGCCATTATTCTTGCATCAGATAAAAAGATGTTTTTTTC GAAAGGACATCTTGATGCTGAGAGGATCTGA
Upstream 100 bases:
>100_bases TTCAAAAAAATCAAGAAAATATTTATACTCTTGGCTATCAAAATGGATCTAAATCTTAAAATAAGGTCAATTACAAATCA TTTAAAAGTAGAGTGAATAA
Downstream 100 bases:
>100_bases ATGACGAATAATTCCAAAGAATTCGAAAACTCTTTCCCTTACCTCTATCCCAAAATCTCAATGTGCCTTAAAAATTTTAT CACTTTCATTTTTTCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: CAAX Amino Protease Family Protein; Methyltransferase Type; CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMISTSKNSDLKKDFINRLINLRLI RPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYSFSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMA SLIFGILWSLWHFPLIFVKDMYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI
Sequences:
>Translated_276_residues MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMISTSKNSDLKKDFINRLINLRLI RPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYSFSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMA SLIFGILWSLWHFPLIFVKDMYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI >Mature_276_residues MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMISTSKNSDLKKDFINRLINLRLI RPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYSFSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMA SLIFGILWSLWHFPLIFVKDMYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31509; Mature: 31509
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMIST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC SKNSDLKKDFINRLINLRLIRPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC FSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMASLIFGILWSLWHFPLIFVKD CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC >Mature Secondary Structure MIPKYRYKPGVYFTATFIITYTLWFAGAYLSFQDDSGLYMLLMIPGLMAPFLVSLFMIST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC SKNSDLKKDFINRLINLRLIRPKVLLAFFIIMPLTVLVSIFLSLPFGGSTSQFQFAEGYS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC FSSGFVPAFLTLLLAATFEELGWRGYAFDSLQSRYTFFMASLIFGILWSLWHFPLIFVKD CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MYQYEIFHENIWYAVNFFVGVIPMGVIISWICIKNGKSVLAAILIHVSINFLQEALQMTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FAKCIETVVITAVAAIILASDKKMFFSKGHLDAERI HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA