Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228289

Identifier: 21228289

GI number: 21228289

Start: 2595591

End: 2596370

Strand: Direct

Name: 21228289

Synonym: MM_2187

Alternate gene names: NA

Gene position: 2595591-2596370 (Clockwise)

Preceding gene: 21228288

Following gene: 21228290

Centisome position: 63.36

GC content: 42.18

Gene sequence:

>780_bases
ATGAGGCTTCAGATTATTGAAGAAGTCACCGGTGAAGTAAGCTCAAATCCAGTTGTTTCCGGCTGGATCAAAAAAGACCG
CGTTCGCGCAGTCACAGCCGGTTATCTTAACAGCCTCTCAGATGAAGAGTTAATCGAAAAATCCACAACAGACCAACTTG
CAGCCGAGCTTGCTGCTATCATAAAAACAGAAATTCGGAACGCACGTCCATCTGCTGAACCTGATGAGCTAGAAGCTGTT
CTTAACAGGGTCGATACAGATGTTAGAATGGGTGTTGCAAACGGAATTTGTGCAGTAACAGTTAGCAAAGGTGAAACTCT
TGACATCCTTTTTGGAAAAATTGGCAATGAGCTAAAAAACCTTGCAGATGAGACTGTAGACAAATATTCGGGAGAGATAG
CTGATAGTATCACAAAAAGACTGGACAGGACGATGGCAGCTGTTCCCTGCGGACTTCCGGTAATGCCTCCGCACTGGATT
TTTACGGTGAATGTCTGGACGTATGAGATTGTGGGGAAGTATCAGACTTTTACTGTTATTGATAATGACAATGAGGTGAT
TCCAAAGCCTTACTTTGGACATAAAGGGCAGAGGTATGTGAGAGAGCAACAATCTATTACTCTTAAAGGGGAGTATCTAG
GTGAAAACAAGCCAGTTAATTTCAGATTCAACGGTTATGCTTCTACAATTGTTGGTCCTAGTCCTAAAGGTGTAGGAGAT
AAAATAGAAGGTAGTACAGAAGAGTCTGCAGGTTATAAAGATCTATACAATGAATGGTGA

Upstream 100 bases:

>100_bases
GCTTTTGCTATTTTCCGGAGATGAAAACCTCGATTTGGAGATCTATTTTTAAATGTCTTCAAACCTTTTTTTCATCTGTA
AAAATCTTCAGGGCTGTTTA

Downstream 100 bases:

>100_bases
TTAACTATGAATTCAAGGGTCATTATATGTTCTATATTTATTCTTTTAATGTTAATGGGGGTTGTATCTGCCACTAGCCA
ATATGGTTCGATTGATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRLQIIEEVTGEVSSNPVVSGWIKKDRVRAVTAGYLNSLSDEELIEKSTTDQLAAELAAIIKTEIRNARPSAEPDELEAV
LNRVDTDVRMGVANGICAVTVSKGETLDILFGKIGNELKNLADETVDKYSGEIADSITKRLDRTMAAVPCGLPVMPPHWI
FTVNVWTYEIVGKYQTFTVIDNDNEVIPKPYFGHKGQRYVREQQSITLKGEYLGENKPVNFRFNGYASTIVGPSPKGVGD
KIEGSTEESAGYKDLYNEW

Sequences:

>Translated_259_residues
MRLQIIEEVTGEVSSNPVVSGWIKKDRVRAVTAGYLNSLSDEELIEKSTTDQLAAELAAIIKTEIRNARPSAEPDELEAV
LNRVDTDVRMGVANGICAVTVSKGETLDILFGKIGNELKNLADETVDKYSGEIADSITKRLDRTMAAVPCGLPVMPPHWI
FTVNVWTYEIVGKYQTFTVIDNDNEVIPKPYFGHKGQRYVREQQSITLKGEYLGENKPVNFRFNGYASTIVGPSPKGVGD
KIEGSTEESAGYKDLYNEW
>Mature_259_residues
MRLQIIEEVTGEVSSNPVVSGWIKKDRVRAVTAGYLNSLSDEELIEKSTTDQLAAELAAIIKTEIRNARPSAEPDELEAV
LNRVDTDVRMGVANGICAVTVSKGETLDILFGKIGNELKNLADETVDKYSGEIADSITKRLDRTMAAVPCGLPVMPPHWI
FTVNVWTYEIVGKYQTFTVIDNDNEVIPKPYFGHKGQRYVREQQSITLKGEYLGENKPVNFRFNGYASTIVGPSPKGVGD
KIEGSTEESAGYKDLYNEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28679; Mature: 28679

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQIIEEVTGEVSSNPVVSGWIKKDRVRAVTAGYLNSLSDEELIEKSTTDQLAAELAAI
CCEEHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH
IKTEIRNARPSAEPDELEAVLNRVDTDVRMGVANGICAVTVSKGETLDILFGKIGNELKN
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHH
LADETVDKYSGEIADSITKRLDRTMAAVPCGLPVMPPHWIFTVNVWTYEIVGKYQTFTVI
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECEEEEEEE
DNDNEVIPKPYFGHKGQRYVREQQSITLKGEYLGENKPVNFRFNGYASTIVGPSPKGVGD
ECCCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCC
KIEGSTEESAGYKDLYNEW
CCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MRLQIIEEVTGEVSSNPVVSGWIKKDRVRAVTAGYLNSLSDEELIEKSTTDQLAAELAAI
CCEEHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH
IKTEIRNARPSAEPDELEAVLNRVDTDVRMGVANGICAVTVSKGETLDILFGKIGNELKN
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHH
LADETVDKYSGEIADSITKRLDRTMAAVPCGLPVMPPHWIFTVNVWTYEIVGKYQTFTVI
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECEEEEEEE
DNDNEVIPKPYFGHKGQRYVREQQSITLKGEYLGENKPVNFRFNGYASTIVGPSPKGVGD
ECCCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCCC
KIEGSTEESAGYKDLYNEW
CCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA