Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228290

Identifier: 21228290

GI number: 21228290

Start: 2596377

End: 2596976

Strand: Direct

Name: 21228290

Synonym: MM_2188

Alternate gene names: NA

Gene position: 2596377-2596976 (Clockwise)

Preceding gene: 21228289

Following gene: 21228293

Centisome position: 63.38

GC content: 39.33

Gene sequence:

>600_bases
ATGAATTCAAGGGTCATTATATGTTCTATATTTATTCTTTTAATGTTAATGGGGGTTGTATCTGCCACTAGCCAATATGG
TTCGATTGATGTTTATTACAATGATGAGATATTACCTGGTAAAGAGGTTGCAAAACCAACACTCAAAATTGGAGAACCCT
TCAAAGTAAGAATTGAAATGACACTTAATCAGACTAGCACTGTGTTTGTGCAAGTTTGTAGTTTAGGAGGTAATTTCTTT
GAAGTCAAAGAAGGTCCGTCAGAATTTGGAAAAACATTTTATATAAAGTCTTTAGACCCTGGAAAGCATGTTTTTGAATG
GACACTCGTTCCTACGGATGAGTGGGCTGGGGGGTCGATTCCAATAAATTTCTGGTATCAGATCAACCTTATAGAAGAAG
ATGAACCTGCTGTAAAAGGAGAATTTACAGTCGCTTACTGCACGATTTCCAACGAACATTACGAAGGCAAAATTCACACT
TCTGAAGAGCAGCCAGTTTCAGAAACCGAATCCTCCCCCACATCAGCATCTACTCCAGCCTTTACACTTGTCGGCGCGCT
TTCAGTTATTGCATTGGTTTTTGCCCTGTTCCGCAGGTAA

Upstream 100 bases:

>100_bases
AATTGTTGGTCCTAGTCCTAAAGGTGTAGGAGATAAAATAGAAGGTAGTACAGAAGAGTCTGCAGGTTATAAAGATCTAT
ACAATGAATGGTGATTAACT

Downstream 100 bases:

>100_bases
AATGCTTGCGGAAGGATTTATTTAGCTATCCCTTAATCCGTTTTAAAAGTCAGGACCAAAAAAGTAATTTTAAGTTAGGA
GAGGTTCGTCTTTCGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEMTLNQTSTVFVQVCSLGGNFF
EVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSIPINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHT
SEEQPVSETESSPTSASTPAFTLVGALSVIALVFALFRR

Sequences:

>Translated_199_residues
MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEMTLNQTSTVFVQVCSLGGNFF
EVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSIPINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHT
SEEQPVSETESSPTSASTPAFTLVGALSVIALVFALFRR
>Mature_199_residues
MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEMTLNQTSTVFVQVCSLGGNFF
EVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSIPINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHT
SEEQPVSETESSPTSASTPAFTLVGALSVIALVFALFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22093; Mature: 22093

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEM
CCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCEECCCCEEEEEEE
TLNQTSTVFVQVCSLGGNFFEVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSI
EECCCCEEEEEHHHCCCCEEEECCCHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCE
PINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHTSEEQPVSETESSPTSASTPA
EEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCEEECCCCCCCCCCCCCCCCCCCCH
FTLVGALSVIALVFALFRR
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEM
CCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCEECCCCEEEEEEE
TLNQTSTVFVQVCSLGGNFFEVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSI
EECCCCEEEEEHHHCCCCEEEECCCHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCE
PINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHTSEEQPVSETESSPTSASTPA
EEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCEEECCCCCCCCCCCCCCCCCCCCH
FTLVGALSVIALVFALFRR
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA